Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 19 869 NP_001087241 19 869 XP_005265799 19 869 XP_005265798 19 869 XP_005265797 19 869 NP_001258681 18 1482 NP_001011544 17 2528 NP_005357 17 2528 NP_001275896 17 2528 NP_001275894 17 2528 NP_077817 17 2528 NP_001275893 17 2528 XP_005247863 17 2528 NP_036604 17 4312 NP_002358 17 4312 NP_002355 17 4312 NP_872312 17 4312 XP_006716601 17 4312 NP_055085 16 5631 NP_001229965 16 5631 NP_001119807 16 5631 XP_006723055 16 5631 XP_005258525 16 5631 NP_056224 16 7355 NP_001139681 16 7355 NP_001230713 16 7355 NP_001137311 16 7355 NP_002590 16 7355 NP_619648 16 7355 XP_005274097 16 7355 XP_006714236 16 7355 XP_006714235 16 7355 NP_071745 16 7355 NP_001123612 16 7355 NP_000397 15 9605 NP_001012781 15 9605 NP_001093391 15 9605 NP_573403 15 9605 NP_775970 15 9605 NP_001264236 15 9605 NP_001073880 15 9605 NP_001005333 15 9605 NP_877496 15 9605 NP_001005332 15 9605 NP_619649 15 9605 XP_005260559 15 9605 XP_005260558 15 9605 XP_006723918 15 9605 XP_005260557 15 9605 XP_005260556 15 9605 XP_005260555 15 9605 XP_005260554 15 9605 XP_006723917 15 9605 XP_005260553 15 9605 XP_006722724 15 9605 XP_005259839 15 9605 XP_006722723 15 9605 XP_006722722 15 9605 NP_008917 15 9605>NP_000213 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKLKVLSYL 9 S+LKVLSYL Sbjct: 639 SELKVLSYL 647>NP_001087241 Length = 972 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKLKVLSYL 9 S+LKVLSYL Sbjct: 635 SELKVLSYL 643>XP_005265799 Length = 973 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKLKVLSYL 9 S+LKVLSYL Sbjct: 636 SELKVLSYL 644>XP_005265798 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKLKVLSYL 9 S+LKVLSYL Sbjct: 640 SELKVLSYL 648>XP_005265797 Length = 977 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKLKVLSYL 9 S+LKVLSYL Sbjct: 640 SELKVLSYL 648>NP_001258681 Length = 275 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL YL Sbjct: 213 SKMKVLEYL 221>NP_001011544 Length = 400 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL Y+ Sbjct: 366 SKMKVLEYI 374>NP_005357 Length = 429 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL Y+ Sbjct: 395 SKMKVLEYI 403>NP_001275896 Length = 445 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 KLKVLSY Sbjct: 439 KLKVLSY 445>NP_001275894 Length = 577 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 KLKVLSY Sbjct: 571 KLKVLSY 577>NP_077817 Length = 597 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 KLKVLSY Sbjct: 591 KLKVLSY 597>NP_001275893 Length = 579 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 KLKVLSY Sbjct: 573 KLKVLSY 579>XP_005247863 Length = 597 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 KLKVLSY Sbjct: 591 KLKVLSY 597>NP_036604 Length = 466 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKLKVLSYL 9 SKLK L YL Sbjct: 63 SKLKKLEYL 71>NP_002358 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL +L Sbjct: 281 SKMKVLEFL 289>NP_002355 Length = 319 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL +L Sbjct: 284 SKMKVLEFL 292>NP_872312 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL +L Sbjct: 284 SKMKVLEFL 292>XP_006716601 Length = 469 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SKLKVLSYL 9 SKLK L YL Sbjct: 66 SKLKKLEYL 74>NP_055085 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LKVLSY+ Sbjct: 338 LKVLSYI 344>NP_001229965 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LKVLSY+ Sbjct: 338 LKVLSYI 344>NP_001119807 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LKVLSY+ Sbjct: 338 LKVLSYI 344>XP_006723055 Length = 260 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LKVLSY+ Sbjct: 111 LKVLSYI 117>XP_005258525 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LKVLSY+ Sbjct: 129 LKVLSYI 135>NP_056224 Length = 3123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKVLSYL 9 LK+LSY+ Sbjct: 1130 LKILSYI 1136>NP_001139681 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 +LKVL YL Sbjct: 237 QLKVLQYL 244>NP_001230713 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 +LKVL YL Sbjct: 225 QLKVLQYL 232>NP_001137311 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 +LKVL YL Sbjct: 239 QLKVLQYL 246>NP_002590 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 +LKVL YL Sbjct: 246 QLKVLQYL 253>NP_619648 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 K+KVL Y+ Sbjct: 477 KMKVLEYM 484>XP_005274097 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLKVLSYL 9 +LKVL YL Sbjct: 245 QLKVLQYL 252>XP_006714236 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 S LKV+S+L Sbjct: 747 SDLKVISFL 755>XP_006714235 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 S LKV+S+L Sbjct: 817 SDLKVISFL 825>NP_071745 Length = 960 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 +LKVLSY Sbjct: 136 ELKVLSY 142>NP_001123612 Length = 960 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLKVLSY 8 +LKVLSY Sbjct: 136 ELKVLSY 142>NP_000397 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 115 KVLSYL 120>NP_001012781 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 115 KVLSYL 120>NP_001093391 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 286 SKMKVLEFV 294>NP_573403 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 497 SKLRSLSY 504>NP_775970 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 280 SKMKVLEFV 288>NP_001264236 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 282 SKMKVLEFV 290>NP_001073880 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 345 KVLSYL 350>NP_001005333 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 699 SKMKVLRFI 707>NP_877496 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 497 SKLRSLSY 504>NP_001005332 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 643 SKMKVLRFI 651>NP_619649 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 259 SKMKVLKFV 267>XP_005260559 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 314 SKLRSLSY 321>XP_005260558 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 314 SKLRSLSY 321>XP_006723918 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 409 SKLRSLSY 416>XP_005260557 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 409 SKLRSLSY 416>XP_005260556 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 409 SKLRSLSY 416>XP_005260555 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 409 SKLRSLSY 416>XP_005260554 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 409 SKLRSLSY 416>XP_006723917 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 497 SKLRSLSY 504>XP_005260553 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKLKVLSY 8 SKL+ LSY Sbjct: 497 SKLRSLSY 504>XP_006722724 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 310 KVLSYL 315>XP_005259839 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 310 KVLSYL 315>XP_006722723 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 344 KVLSYL 349>XP_006722722 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVLSYL 9 KVLSYL Sbjct: 356 KVLSYL 361>NP_008917 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKLKVLSYL 9 SK+KVL ++ Sbjct: 643 SKMKVLRFI 651Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.133 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,766 Number of extensions: 591 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |