Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 869 NP_004561 19 869 NP_001275703 19 869 XP_005253450 19 869 XP_006719151 19 869 NP_004628 17 4312 NP_997191 17 4312 NP_001152956 17 4312 NP_775105 17 4312 NP_001036148 17 4312 XP_006715506 17 4312 XP_006715505 17 4312 XP_006715504 17 4312 XP_006715503 17 4312 XP_006715502 17 4312 XP_006711682 17 4312 NP_065975 16 5631 NP_060250 16 7355 NP_001032 16 7355 NP_644814 16 7355 NP_001182005 16 7355 XP_006723251 16 7355 XP_006721859 16 7355 XP_005251324 16 7355 XP_005251323 16 7355 NP_055833 15 9605 NP_001186871 15 9605 NP_001188358 15 9605 NP_036427 15 9605 NP_001186210 15 9605 NP_001035374 15 9605 NP_001035375 15 9605 NP_065856 15 9605 XP_006724247 15 9605 XP_006724246 15 9605 XP_006724245 15 9605 XP_006724244 15 9605 XP_006724243 15 9605 XP_005261477 15 9605 XP_005261476 15 9605 XP_005261474 15 9605 XP_006724242 15 9605 XP_005261473 15 9605 XP_005261472 15 9605 XP_006722575 15 9605 XP_006721308 15 9605 XP_005256149 15 9605 XP_006715464 15 9605 XP_006715463 15 9605 XP_006715462 15 9605 XP_006715461 15 9605 XP_006715460 15 9605 XP_006715459 15 9605 XP_006715458 15 9605 XP_006715457 15 9605 XP_006715456 15 9605>NP_001275701 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 SKKSSN YL Sbjct: 1255 SKKSSNLYL 1263>NP_004561 Length = 1445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 SKKSSN YL Sbjct: 1214 SKKSSNLYL 1222>NP_001275703 Length = 1264 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 SKKSSN YL Sbjct: 1033 SKKSSNLYL 1041>XP_005253450 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 SKKSSN YL Sbjct: 1255 SKKSSNLYL 1263>XP_006719151 Length = 1486 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 SKKSSN YL Sbjct: 1255 SKKSSNLYL 1263>NP_004628 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKKSSNQY 8 +KK SNQY Sbjct: 30 NKKFSNQY 37>NP_997191 Length = 1888 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SK+ NQY+ Sbjct: 710 SKRKQNQYI 718>NP_001152956 Length = 1736 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SK+ NQY+ Sbjct: 710 SKRKQNQYI 718>NP_775105 Length = 1659 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>NP_001036148 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006715506 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006715505 Length = 1673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006715504 Length = 1683 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006715503 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006715502 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 S +SSNQ+L Sbjct: 142 SSESSNQFL 150>XP_006711682 Length = 1739 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SK+ NQY+ Sbjct: 561 SKRKQNQYI 569>NP_065975 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKK NQ++ Sbjct: 196 SKKDQNQFI 204>NP_060250 Length = 2997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKKSSNQ 7 SKKSSN+ Sbjct: 695 SKKSSNK 701>NP_001032 Length = 1827 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSSNQYL 9 KSS QYL Sbjct: 683 KSSRQYL 689>NP_644814 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSSNQYL 9 KSS QYL Sbjct: 25 KSSEQYL 31>NP_001182005 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSSNQYL 9 KSS QYL Sbjct: 45 KSSKQYL 51>XP_006723251 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSSNQYL 9 KSS QYL Sbjct: 45 KSSKQYL 51>XP_006721859 Length = 844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSSNQYL 9 KSS QYL Sbjct: 25 KSSEQYL 31>XP_005251324 Length = 2996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKKSSNQ 7 SKKSSN+ Sbjct: 695 SKKSSNK 701>XP_005251323 Length = 2997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKKSSNQ 7 SKKSSN+ Sbjct: 695 SKKSSNK 701>NP_055833 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318>NP_001186871 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1302 KKSSNEKL 1309>NP_001188358 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 905 SKKSKARYL 913>NP_036427 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>NP_001186210 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>NP_001035374 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSSNQY 8 KS+NQY Sbjct: 674 KSNNQY 679>NP_001035375 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSSNQY 8 KS+NQY Sbjct: 627 KSNNQY 632>NP_065856 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 +KK +N+YL Sbjct: 201 TKKLANKYL 209>XP_006724247 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006724246 Length = 2103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006724245 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006724244 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006724243 Length = 2196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_005261477 Length = 2200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_005261476 Length = 2210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 910 SKKSKARYL 918>XP_005261474 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006724242 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_005261473 Length = 2250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_005261472 Length = 2255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SKKSSNQYL 9 SKKS +YL Sbjct: 955 SKKSKARYL 963>XP_006722575 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKKSSNQYL 9 +KK +N+YL Sbjct: 245 TKKLANKYL 253>XP_006721308 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSSNQY 8 KS+NQY Sbjct: 642 KSNNQY 647>XP_005256149 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KSSNQY 8 KS+NQY Sbjct: 689 KSNNQY 694>XP_006715464 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318>XP_006715463 Length = 2434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318>XP_006715462 Length = 2452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1278 KKSSNEKL 1285>XP_006715461 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1302 KKSSNEKL 1309>XP_006715460 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318>XP_006715459 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1301 KKSSNEKL 1308>XP_006715458 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1302 KKSSNEKL 1309>XP_006715457 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318>XP_006715456 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKSSNQYL 9 KKSSN+ L Sbjct: 1311 KKSSNEKL 1318Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.102 0.238 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,965 Number of extensions: 854 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |