Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 21 229 XP_005265800 21 229 XP_006714103 21 229 XP_006714102 21 229 NP_057009 17 2528 NP_991404 17 2528 NP_001247419 17 2528 NP_991403 17 2528 NP_060480 17 2528 NP_066270 17 3301 NP_001234930 17 3301 NP_001234929 17 3301 NP_001015001 17 3301 NP_003002 17 3301 NP_001116293 17 3301 NP_001274666 17 3301 NP_003365 17 4312 XP_005272132 17 4312 NP_003357 16 5631 NP_996898 16 7355 NP_001247418 16 7355 NP_877398 16 7355 NP_056007 16 7355 XP_006724409 16 7355 XP_005261851 16 7355 XP_005261850 16 7355 XP_005260738 16 7355 XP_006723618 16 7355 XP_005259039 16 7355 XP_005259037 16 7355 XP_005247321 16 7355 XP_006713623 16 7355 NP_001138678 16 7355 NP_000213 15 9605 NP_001087241 15 9605 NP_004932 15 9605 NP_005493 15 9605 NP_201570 15 9605 NP_201569 15 9605 NP_003663 15 9605 NP_065717 15 9605 NP_000687 15 9605 XP_006726856 15 9605 XP_006723958 15 9605 XP_005257171 15 9605 XP_005257170 15 9605 XP_005251837 15 9605 XP_005251835 15 9605 XP_006717058 15 9605 XP_005251833 15 9605 XP_005251831 15 9605 XP_005251830 15 9605 XP_006714959 15 9605 XP_006714958 15 9605 XP_005266004 15 9605 XP_005265799 15 9605 XP_005265798 15 9605 XP_005265797 15 9605 XP_005265253 15 9605 XP_005271353 15 9605 XP_005271351 15 9605 XP_006710150 15 9605 NP_886552 15 9605>NP_006197 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 +KIKSGYRM Sbjct: 907 NKIKSGYRM 915>XP_005265800 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 +KIKSGYRM Sbjct: 907 NKIKSGYRM 915>XP_006714103 Length = 1111 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 +KIKSGYRM Sbjct: 929 NKIKSGYRM 937>XP_006714102 Length = 1114 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 +KIKSGYRM Sbjct: 932 NKIKSGYRM 940>NP_057009 Length = 630 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 S+++SGYR+ Sbjct: 366 SEVRSGYRI 374>NP_991404 Length = 581 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 S+++SGYR+ Sbjct: 317 SEVRSGYRI 325>NP_001247419 Length = 541 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 S+++SGYR+ Sbjct: 277 SEVRSGYRI 285>NP_991403 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SKIKSGYRM 9 S+++SGYR+ Sbjct: 385 SEVRSGYRI 393>NP_060480 Length = 429 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SK+KSGY Sbjct: 134 SKLKSGY 140>NP_066270 Length = 417 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI+SGY Sbjct: 147 SKIRSGY 153>NP_001234930 Length = 266 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 IKSGYR+ Sbjct: 107 IKSGYRI 113>NP_001234929 Length = 268 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 IKSGYR+ Sbjct: 109 IKSGYRI 115>NP_001015001 Length = 417 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI+SGY Sbjct: 147 SKIRSGY 153>NP_003002 Length = 277 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 IKSGYR+ Sbjct: 118 IKSGYRI 124>NP_001116293 Length = 290 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 IKSGYR+ Sbjct: 131 IKSGYRI 137>NP_001274666 Length = 302 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 IKSGYR+ Sbjct: 141 IKSGYRI 147>NP_003365 Length = 283 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKIKSGYR 8 +KIK+GY+ Sbjct: 112 AKIKTGYK 119>XP_005272132 Length = 283 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKIKSGYR 8 +KIK+GY+ Sbjct: 112 AKIKTGYK 119>NP_003357 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SKIKSGYRM 9 +K+K+GY M Sbjct: 376 NKLKAGYLM 384>NP_996898 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 SK+K G+R Sbjct: 479 SKVKRGWR 486>NP_001247418 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIKSGYRM 9 + ++SGYR+ Sbjct: 365 ASVRSGYRI 373>NP_877398 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGYR+ Sbjct: 645 KSGYRL 650>NP_056007 Length = 1216 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGYR+ Sbjct: 645 KSGYRL 650>XP_006724409 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KIKSGYR 8 KI+ GYR Sbjct: 1189 KIRDGYR 1195>XP_005261851 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KIKSGYR 8 KI+ GYR Sbjct: 1189 KIRDGYR 1195>XP_005261850 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KIKSGYR 8 KI+ GYR Sbjct: 1189 KIRDGYR 1195>XP_005260738 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGYR+ Sbjct: 645 KSGYRL 650>XP_006723618 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGYR+ Sbjct: 645 KSGYRL 650>XP_005259039 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIKSGYRM 9 + ++SGYR+ Sbjct: 316 ASVRSGYRI 324>XP_005259037 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SKIKSGYRM 9 + ++SGYR+ Sbjct: 384 ASVRSGYRI 392>XP_005247321 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 SK+K G+R Sbjct: 479 SKVKRGWR 486>XP_006713623 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 SK+K G+R Sbjct: 462 SKVKRGWR 469>NP_001138678 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KIKSGYR 8 KI+ GYR Sbjct: 1189 KIRDGYR 1195>NP_000213 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSGYRM 9 IK G+RM Sbjct: 883 IKEGFRM 889>NP_001087241 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSGYRM 9 IK G+RM Sbjct: 879 IKEGFRM 885>NP_004932 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 +K+KS YR Sbjct: 216 NKVKSRYR 223>NP_005493 Length = 2261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>NP_201570 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI++GY Sbjct: 198 SKIENGY 204>NP_201569 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI++GY Sbjct: 198 SKIENGY 204>NP_003663 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI++GY Sbjct: 198 SKIENGY 204>NP_065717 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 I+SGYR+ Sbjct: 93 IESGYRI 99>NP_000687 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KIKSGYRM 9 K+K GY M Sbjct: 390 KLKDGYYM 397>XP_006726856 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KIKSGYR 8 ++KSG+R Sbjct: 184 RVKSGFR 190>XP_006723958 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KIKSGYR 8 ++KSG+R Sbjct: 184 RVKSGFR 190>XP_005257171 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 +K+KS YR Sbjct: 216 NKVKSRYR 223>XP_005257170 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SKIKSGYR 8 +K+KS YR Sbjct: 214 NKVKSRYR 221>XP_005251837 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>XP_005251835 Length = 2074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>XP_006717058 Length = 2100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>XP_005251833 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 507 NKIKDGY 513>XP_005251831 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>XP_005251830 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SKIKSGY 7 +KIK GY Sbjct: 567 NKIKDGY 573>XP_006714959 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 I+SGYR+ Sbjct: 57 IESGYRI 63>XP_006714958 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 I+SGYR+ Sbjct: 57 IESGYRI 63>XP_005266004 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKSGYRM 9 I+SGYR+ Sbjct: 96 IESGYRI 102>XP_005265799 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSGYRM 9 IK G+RM Sbjct: 880 IKEGFRM 886>XP_005265798 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSGYRM 9 IK G+RM Sbjct: 883 IKEGFRM 889>XP_005265797 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSGYRM 9 IK G+RM Sbjct: 884 IKEGFRM 890>XP_005265253 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGY+M Sbjct: 417 KSGYQM 422>XP_005271353 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI++GY Sbjct: 199 SKIENGY 205>XP_005271351 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SKIKSGY 7 SKI++GY Sbjct: 199 SKIENGY 205>XP_006710150 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KIKSGYR 8 ++KSG+R Sbjct: 184 RVKSGFR 190>NP_886552 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSGYRM 9 KSGY+M Sbjct: 417 KSGYQM 422Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.128 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 536,090 Number of extensions: 947 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |