Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1482 NP_001077059 18 1482 XP_005264440 18 1482 XP_006712099 18 1482 XP_005264439 18 1482 XP_005264438 18 1482 NP_060197 18 1482 NP_002323 17 2528 NP_065737 16 5631 XP_005255211 16 5631 NP_001120920 16 5631 NP_000654 16 5631 NP_001180277 16 7355 NP_001180276 16 7355 NP_001124477 16 7355 NP_002388 16 7355 NP_001180279 16 7355 NP_005831 16 7355 XP_005274857 16 7355 XP_005274700 16 7355 XP_005274699 16 7355 XP_006714688 16 7355 XP_006714685 16 7355 XP_006714684 16 7355 XP_006714683 16 7355 XP_005248568 16 7355 XP_006714682 16 7355 XP_006714681 16 7355 NP_065194 15 9605 NP_001008 15 9605 NP_001276018 15 9605 NP_079048 15 9605 NP_001276019 15 9605 NP_001276017 15 9605 NP_001276020 15 9605 NP_055524 15 9605 NP_078896 15 9605 XP_006723447 15 9605 XP_006723446 15 9605 XP_006723445 15 9605 XP_006723444 15 9605 XP_005271279 15 9605 XP_005271277 15 9605 XP_005271276 15 9605 XP_005271275 15 9605 XP_005271273 15 9605>NP_004110 Length = 993 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SKHLSQSAL 9 SKH SQSAL Sbjct: 333 SKHPSQSAL 341>NP_001077059 Length = 644 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 364 KHLSQSSL 371>XP_005264440 Length = 352 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 72 KHLSQSSL 79>XP_006712099 Length = 708 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 428 KHLSQSSL 435>XP_005264439 Length = 715 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 435 KHLSQSSL 442>XP_005264438 Length = 753 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 473 KHLSQSSL 480>NP_060197 Length = 689 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 KHLSQS+L Sbjct: 409 KHLSQSSL 416>NP_002323 Length = 4544 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 HLSQSAL 9 HLSQSAL Sbjct: 1305 HLSQSAL 1311>NP_065737 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKHLSQSA 8 S+H+SQ+A Sbjct: 25 SRHISQAA 32>XP_005255211 Length = 518 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKHLSQSA 8 S+H+SQ+A Sbjct: 43 SRHISQAA 50>NP_001120920 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKHLSQSA 8 S+H+SQ+A Sbjct: 25 SRHISQAA 32>NP_000654 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SKHLSQSA 8 S+H+SQ+A Sbjct: 25 SRHISQAA 32>NP_001180277 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 315 STHLSQSS 322>NP_001180276 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 381 STHLSQSS 388>NP_001124477 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 361 STHLSQSS 368>NP_002388 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 371 STHLSQSS 378>NP_001180279 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 371 STHLSQSS 378>NP_005831 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 +HLSQS++ Sbjct: 77 QHLSQSSI 84>XP_005274857 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 +HLSQS++ Sbjct: 77 QHLSQSSI 84>XP_005274700 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 +HLSQS++ Sbjct: 77 QHLSQSSI 84>XP_005274699 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KHLSQSAL 9 +HLSQS++ Sbjct: 77 QHLSQSSI 84>XP_006714688 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 381 STHLSQSS 388>XP_006714685 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 361 STHLSQSS 368>XP_006714684 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 363 STHLSQSS 370>XP_006714683 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 369 STHLSQSS 376>XP_005248568 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 371 STHLSQSS 378>XP_006714682 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 371 STHLSQSS 378>XP_006714681 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SKHLSQSA 8 S HLSQS+ Sbjct: 371 STHLSQSS 378>NP_065194 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 H SQSAL Sbjct: 1300 HTSQSAL 1306>NP_001008 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KHLSQSAL 9 K LSQSAL Sbjct: 9 KGLSQSAL 16>NP_001276018 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 783 KHISQS 788>NP_079048 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 802 KHISQS 807>NP_001276019 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 802 KHISQS 807>NP_001276017 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 802 KHISQS 807>NP_001276020 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 442 KHISQS 447>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SKHLSQSA 8 S H SQSA Sbjct: 595 SSHASQSA 602>NP_078896 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 HL QSAL Sbjct: 46 HLRQSAL 52>XP_006723447 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 HL QSAL Sbjct: 46 HLRQSAL 52>XP_006723446 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 HL QSAL Sbjct: 46 HLRQSAL 52>XP_006723445 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 HL QSAL Sbjct: 46 HLRQSAL 52>XP_006723444 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLSQSAL 9 HL QSAL Sbjct: 46 HLRQSAL 52>XP_005271279 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 442 KHISQS 447>XP_005271277 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 611 KHISQS 616>XP_005271276 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 727 KHISQS 732>XP_005271275 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 727 KHISQS 732>XP_005271273 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KHLSQS 7 KH+SQS Sbjct: 790 KHISQS 795Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.106 0.250 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 520,246 Number of extensions: 474 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |