Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001248770 18 1482 NP_001098719 18 1482 NP_001098718 18 1482 NP_079056 18 1482 NP_001551 17 2528 XP_005262468 17 2528 NP_001075109 17 3301 NP_001273511 17 4312 NP_001273512 17 4312 NP_001273510 17 4312 NP_065952 17 4312 XP_006725204 17 4312 XP_006725203 17 4312 XP_005253084 17 4312 XP_005253082 17 4312 NP_001271175 16 5631 NP_056371 16 5631 NP_001271176 16 5631 NP_001271174 16 5631 NP_001116242 16 5631 NP_115911 16 5631 XP_005267576 16 5631 XP_006720175 16 5631 XP_006720174 16 5631 XP_005267573 16 5631 XP_006720173 16 5631 XP_006720172 16 5631 XP_005267571 16 5631 XP_006711641 16 5631 XP_005245604 16 5631 XP_005245603 16 5631 NP_612473 16 5631 NP_079331 16 7355 NP_001245198 16 7355 NP_001245184 16 7355 NP_001245187 16 7355 NP_001245186 16 7355 NP_001245185 16 7355 NP_001245188 16 7355 NP_001245196 16 7355 NP_001245189 16 7355 NP_001245190 16 7355 NP_001245195 16 7355 NP_001245180 16 7355 NP_001245197 16 7355 NP_001245179 16 7355 NP_001245194 16 7355 NP_001245183 16 7355 NP_001245191 16 7355 NP_001245199 16 7355 NP_001245193 16 7355 NP_001245178 16 7355 NP_001245182 16 7355 NP_001245181 16 7355 NP_009056 16 7355 NP_001245192 16 7355 NP_872601 16 7355 NP_872600 16 7355 XP_006724939 16 7355 XP_005262575 16 7355 XP_006724938 16 7355 XP_006720761 16 7355 XP_005254749 16 7355 XP_006720760 16 7355 NP_666499 15 9605 NP_705582 15 9605 NP_004173 15 9605 NP_659416 15 9605 NP_666500 15 9605 NP_057040 15 9605 NP_116558 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SIVPMTSRL 9 S+VPMTSRL Sbjct: 3792 SVVPMTSRL 3800>NP_001248770 Length = 1006 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIVPMTSR 8 S++PMTSR Sbjct: 356 SLIPMTSR 363>NP_001098719 Length = 948 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIVPMTSR 8 S++PMTSR Sbjct: 356 SLIPMTSR 363>NP_001098718 Length = 1006 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIVPMTSR 8 S++PMTSR Sbjct: 356 SLIPMTSR 363>NP_079056 Length = 760 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIVPMTSR 8 S++PMTSR Sbjct: 110 SLIPMTSR 117>NP_001551 Length = 427 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SIVPMTSRL 9 +IVP+TSR+ Sbjct: 218 NIVPLTSRV 226>XP_005262468 Length = 286 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SIVPMTSRL 9 +IVP+TSR+ Sbjct: 77 NIVPLTSRV 85>NP_001075109 Length = 4097 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SIVPMTS 7 S+VPMTS Sbjct: 3792 SVVPMTS 3798>NP_001273511 Length = 1647 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 255 VVPTTSRL 262>NP_001273512 Length = 1645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 252 VVPTTSRL 259>NP_001273510 Length = 1649 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 256 VVPTTSRL 263>NP_065952 Length = 1648 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 256 VVPTTSRL 263>XP_006725204 Length = 1646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 253 VVPTTSRL 260>XP_006725203 Length = 1648 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 255 VVPTTSRL 262>XP_005253084 Length = 1646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 253 VVPTTSRL 260>XP_005253082 Length = 1648 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVPMTSRL 9 +VP TSRL Sbjct: 255 VVPTTSRL 262>NP_001271175 Length = 1782 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>NP_056371 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>NP_001271176 Length = 1803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>NP_001271174 Length = 1783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>NP_001116242 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP+T R Sbjct: 314 SVVPLTER 321>NP_115911 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_005267576 Length = 1782 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_006720175 Length = 1783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_006720174 Length = 1803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_005267573 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_006720173 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_006720172 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_005267571 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PMTSRL 9 PMTSRL Sbjct: 1088 PMTSRL 1093>XP_006711641 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_005245604 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_005245603 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP+T R Sbjct: 314 SVVPLTER 321>NP_612473 Length = 119 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S++P TSR Sbjct: 47 SVIPATSR 54>NP_079331 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 S++P+ SRL Sbjct: 312 SVLPLKSRL 320>NP_001245198 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 625 SLVPETSR 632>NP_001245184 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245187 Length = 1399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 726 SLVPETSR 733>NP_001245186 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 550 SLVPETSR 557>NP_001245185 Length = 1335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_001245188 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 658 SLVPETSR 665>NP_001245196 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_001245189 Length = 1377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 704 SLVPETSR 711>NP_001245190 Length = 1389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 716 SLVPETSR 723>NP_001245195 Length = 1367 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_001245180 Length = 1363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 690 SLVPETSR 697>NP_001245197 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245179 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 534 SLVPETSR 541>NP_001245194 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 591 SLVPETSR 598>NP_001245183 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245191 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 647 SLVPETSR 654>NP_001245199 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 550 SLVPETSR 557>NP_001245193 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 703 SLVPETSR 710>NP_001245178 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 771 SLVPETSR 778>NP_001245182 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 690 SLVPETSR 697>NP_001245181 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_009056 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_001245192 Length = 1290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_872601 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_872600 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>XP_006724939 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 674 SLVPETSR 681>XP_005262575 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 719 SLVPETSR 726>XP_006724938 Length = 1234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S+VP TSR Sbjct: 771 SLVPETSR 778>XP_006720761 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 S++P+ SRL Sbjct: 312 SVLPLKSRL 320>XP_005254749 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 S++P+ SRL Sbjct: 312 SVLPLKSRL 320>XP_006720760 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 S++P+ SRL Sbjct: 536 SVLPLKSRL 544>NP_666499 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SIVPMTSRL 9 SIV TSRL Sbjct: 229 SIVEATSRL 237>NP_705582 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 ++VP TSR+ Sbjct: 93 TVVPDTSRI 101>NP_004173 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVPMTSRL 9 ++VP TSR+ Sbjct: 81 TVVPDTSRI 89>NP_659416 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIVPMTSR 8 S++P TSR Sbjct: 492 SVLPYTSR 499>NP_666500 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SIVPMTSRL 9 SIV TSRL Sbjct: 229 SIVEATSRL 237>NP_057040 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SIVPMTSRL 9 SIV TSRL Sbjct: 229 SIVEATSRL 237>NP_116558 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVPMTSR 8 ++P+TSR Sbjct: 127 VIPVTSR 133Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.129 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,604 Number of extensions: 583 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |