Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 299 NP_001035706 18 1935 XP_005255000 18 1935 XP_005254998 18 1935 NP_689914 17 3301 NP_001123887 17 3301 NP_110444 17 3301 NP_776186 17 4312 XP_006715947 17 4312 XP_006713658 17 4312 NP_056110 16 5631 NP_001182612 16 5631 NP_003234 16 5631 NP_001182613 16 5631 NP_004237 16 5631 XP_005258159 16 5631 XP_006722384 16 5631 XP_005256918 16 5631 XP_006710931 16 5631 XP_006710930 16 5631 NP_031386 16 7355 NP_001186734 16 7355 NP_001185739 16 7355 NP_003618 16 7355 XP_005274415 16 7355 XP_005274414 16 7355 NP_005281 15 9605 NP_001185471 15 9605 NP_001185472 15 9605 NP_060028 15 9605 NP_001257903 15 9605 NP_997191 15 9605 NP_689856 15 9605 NP_001152956 15 9605 NP_009121 15 9605 NP_085053 15 9605 NP_002799 15 9605 NP_001265637 15 9605 NP_001265638 15 9605 XP_006722188 15 9605 XP_005257762 15 9605 XP_006722187 15 9605 XP_005257760 15 9605 XP_005257761 15 9605 XP_006721269 15 9605 XP_005269527 15 9605 XP_005269526 15 9605 XP_005265933 15 9605 XP_006711682 15 9605 NP_001020404 15 9605>NP_000312 Length = 928 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVFYNSVF 9 IVFYNSVF Sbjct: 753 IVFYNSVF 760>NP_001035706 Length = 757 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VFYNSVF 9 VFYNS+F Sbjct: 226 VFYNSLF 232>XP_005255000 Length = 721 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VFYNSVF 9 VFYNS+F Sbjct: 226 VFYNSLF 232>XP_005254998 Length = 757 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VFYNSVF 9 VFYNS+F Sbjct: 226 VFYNSLF 232>NP_689914 Length = 5058 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 SI+F NS+F Sbjct: 3461 SIIFSNSLF 3469>NP_001123887 Length = 279 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 SI YNSV+ Sbjct: 191 SIALYNSVY 199>NP_110444 Length = 248 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 SI YNSV+ Sbjct: 160 SIALYNSVY 168>NP_776186 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VFYNSV 8 VFYNSV Sbjct: 83 VFYNSV 88>XP_006715947 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 22 STIFHNTVF 30>XP_006713658 Length = 212 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VFYNSV 8 VFYNSV Sbjct: 83 VFYNSV 88>NP_056110 Length = 2005 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 SIV Y S+F Sbjct: 1636 SIVMYKSLF 1644>NP_001182612 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVFYNSV 8 +V+YNS+ Sbjct: 516 VVYYNSI 522>NP_003234 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVFYNSV 8 +V+YNS+ Sbjct: 517 VVYYNSI 523>NP_001182613 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVFYNSV 8 +V+YNS+ Sbjct: 516 VVYYNSI 522>NP_004237 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVFYNS 7 +VFYNS Sbjct: 233 VVFYNS 238>XP_005258159 Length = 1817 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 SIV Y S+F Sbjct: 1448 SIVMYKSLF 1456>XP_006722384 Length = 1877 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 SIV Y S+F Sbjct: 1508 SIVMYKSLF 1516>XP_005256918 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVFYNS 7 +VFYNS Sbjct: 80 VVFYNS 85>XP_006710931 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVFYNSV 8 +V+YNS+ Sbjct: 517 VVYYNSI 523>XP_006710930 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVFYNSV 8 +V+YNS+ Sbjct: 517 VVYYNSI 523>NP_031386 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 S VF NS+F Sbjct: 75 SAVFLNSLF 83>NP_001186734 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIVFYNSVF 9 S VF NS+F Sbjct: 75 SAVFLNSLF 83>NP_001185739 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 ++ FY+SVF Sbjct: 351 TVGFYSSVF 359>NP_003618 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 ++ FY+SVF Sbjct: 351 TVGFYSSVF 359>XP_005274415 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 ++ FY+SVF Sbjct: 367 TVGFYSSVF 375>XP_005274414 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 ++ FY+SVF Sbjct: 377 TVGFYSSVF 385>NP_005281 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFYNSVF 9 VFY +VF Sbjct: 38 VFYTAVF 44>NP_001185471 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 423 SKLFFNNVF 431>NP_001185472 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 413 SKLFFNNVF 421>NP_060028 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 396 SKLFFNNVF 404>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 396 SKLFFNNVF 404>NP_997191 Length = 1888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SIVFYNSV 8 ++ FYNS+ Sbjct: 1409 TVQFYNSI 1416>NP_689856 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 SIVFYN 6 S++FYN Sbjct: 1231 SLIFYN 1236>NP_001152956 Length = 1736 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SIVFYNSV 8 ++ FYNS+ Sbjct: 1409 TVQFYNSI 1416>NP_009121 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVFYNS 7 I+FYNS Sbjct: 539 ILFYNS 544>NP_085053 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>NP_002799 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFYNSVF 9 V YNS+F Sbjct: 721 VSYNSIF 727>NP_001265637 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFYNSVF 9 V YNS+F Sbjct: 591 VSYNSIF 597>NP_001265638 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VFYNSVF 9 V YNS+F Sbjct: 562 VSYNSIF 568>XP_006722188 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>XP_005257762 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>XP_006722187 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>XP_005257760 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>XP_005257761 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 ++F+NS F Sbjct: 58 LIFHNSCF 65>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 S +F+N+VF Sbjct: 413 SKLFFNNVF 421>XP_005269527 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVFYNS 7 I+FYNS Sbjct: 492 ILFYNS 497>XP_005269526 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IVFYNS 7 I+FYNS Sbjct: 539 ILFYNS 544>XP_005265933 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIVFYNSVF 9 +IVF+ SVF Sbjct: 25 NIVFWFSVF 33>XP_006711682 Length = 1739 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SIVFYNSV 8 ++ FYNS+ Sbjct: 1260 TVQFYNSI 1267>NP_001020404 Length = 121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVFYNSVF 9 I+FY S+F Sbjct: 67 ILFYISIF 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.147 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,393 Number of extensions: 738 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |