Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_055029 18 1482 NP_001029097 17 4312 XP_006718022 17 4312 XP_005270165 17 4312 NP_001786 16 5631 NP_005756 16 5631 NP_003957 16 5631 NP_001243275 16 5631 NP_001026872 16 5631 NP_001243277 16 5631 NP_001243276 16 5631 XP_006714571 16 5631 XP_006714570 16 5631 XP_006714569 16 5631 NP_057002 16 5631 NP_056390 16 7355 NP_001096616 16 7355 NP_001096618 16 7355 NP_001096617 16 7355 NP_060811 16 7355 NP_001265460 16 7355 NP_001265462 16 7355 XP_006725074 16 7355 XP_006725073 16 7355 XP_006715929 16 7355 XP_005250018 16 7355 XP_005250017 16 7355 XP_005250016 16 7355 XP_006715928 16 7355 XP_006715927 16 7355 XP_006715573 16 7355 XP_006715572 16 7355 NP_997219 16 7355 NP_000477 15 9605 NP_036596 15 9605 NP_060151 15 9605 NP_056379 15 9605 NP_787074 15 9605 NP_003921 15 9605 NP_060066 15 9605 NP_001239029 15 9605 NP_001239032 15 9605 NP_001239031 15 9605 NP_001191689 15 9605 XP_005254804 15 9605 XP_006720791 15 9605 XP_005254803 15 9605 XP_005254800 15 9605 XP_005254799 15 9605 XP_005249958 15 9605 XP_006714356 15 9605 NP_004937 15 9605 NP_003913 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 677 SIGFSVHQN 685>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 329 SIGFSVHQN 337>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 677 SIGFSVHQN 685>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 677 SIGFSVHQN 685>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 677 SIGFSVHQN 685>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 SIGFSV QN Sbjct: 677 SIGFSVHQN 685>NP_055029 Length = 288 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SIGFSVRQ 8 SIGF+VRQ Sbjct: 119 SIGFAVRQ 126>NP_001029097 Length = 392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 S+GFSV Q+ Sbjct: 53 SVGFSVLQH 61>XP_006718022 Length = 309 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 S+GFSV Q+ Sbjct: 53 SVGFSVLQH 61>XP_005270165 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 S+GFSV Q+ Sbjct: 14 SVGFSVLQH 22>NP_001786 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SIGFSVRQ 8 SIG+S+R+ Sbjct: 404 SIGYSIRR 411>NP_005756 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SIGFSVRQN 9 S+GFSV+++ Sbjct: 49 SMGFSVKED 57>NP_003957 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 613 IGFQVRQ 619>NP_001243275 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 682 IGFQVRQ 688>NP_001026872 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 682 IGFQVRQ 688>NP_001243277 Length = 1057 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 624 IGFQVRQ 630>NP_001243276 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 736 IGFQVRQ 742>XP_006714571 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 456 IGFQVRQ 462>XP_006714570 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 613 IGFQVRQ 619>XP_006714569 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 IGFSVRQ 8 IGF VRQ Sbjct: 613 IGFQVRQ 619>NP_057002 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SIGFSVR 7 SIGF+VR Sbjct: 50 SIGFAVR 56>NP_056390 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIGFSVRQN 9 S+G S RQN Sbjct: 1104 SVGVSNRQN 1112>NP_001096616 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIGFSVRQN 9 S+G S RQN Sbjct: 1104 SVGVSNRQN 1112>NP_001096618 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIGFSVRQN 9 S+G S RQN Sbjct: 1098 SVGVSNRQN 1106>NP_001096617 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIGFSVRQN 9 S+G S RQN Sbjct: 1125 SVGVSNRQN 1133>NP_060811 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 23 NLGFQLREN 31>NP_001265460 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 23 NLGFQLREN 31>NP_001265462 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 23 NLGFQLREN 31>XP_006725074 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 33 NLGFQLREN 41>XP_006725073 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 33 NLGFQLREN 41>XP_006715929 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 10 SLGFSVGQ 17>XP_005250018 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 10 SLGFSVGQ 17>XP_005250017 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 10 SLGFSVGQ 17>XP_005250016 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 10 SLGFSVGQ 17>XP_006715928 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 51 SLGFSVGQ 58>XP_006715927 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 51 SLGFSVGQ 58>XP_006715573 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 33 NLGFQLREN 41>XP_006715572 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SIGFSVRQN 9 ++GF +R+N Sbjct: 33 NLGFQLREN 41>NP_997219 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIGFSVRQ 8 S+GFSV Q Sbjct: 10 SLGFSVGQ 17>NP_000477 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SIGFSV 6 SIGFSV Sbjct: 163 SIGFSV 168>NP_036596 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGFSVRQN 9 IGF + QN Sbjct: 118 IGFGLEQN 125>NP_060151 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GFSVRQN 9 GF+V QN Sbjct: 41 GFTVNQN 47>NP_056379 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SIGFSVRQN 9 S+G S+R N Sbjct: 63 SLGLSLRHN 71>NP_787074 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGFSVRQN 9 I FS+R N Sbjct: 149 IAFSIRDN 156>NP_003921 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GFSVRQN 9 G+SVR N Sbjct: 168 GYSVRMN 174>NP_060066 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IGFSVR 7 +GFSVR Sbjct: 1179 VGFSVR 1184>NP_001239029 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IGFSVR 7 +GFSVR Sbjct: 1179 VGFSVR 1184>NP_001239032 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IGFSVR 7 +GFSVR Sbjct: 1179 VGFSVR 1184>NP_001239031 Length = 1623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IGFSVR 7 +GFSVR Sbjct: 1179 VGFSVR 1184>NP_001191689 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGFSVRQN 9 IGF + QN Sbjct: 118 IGFGLEQN 125>XP_005254804 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2695 MGFSLRQ 2701>XP_006720791 Length = 4853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2752 MGFSLRQ 2758>XP_005254803 Length = 4854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2760 MGFSLRQ 2766>XP_005254800 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2760 MGFSLRQ 2766>XP_005254799 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2760 MGFSLRQ 2766>XP_005249958 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GFSVRQN 9 G+SVR N Sbjct: 168 GYSVRMN 174>XP_006714356 Length = 964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IGFSVRQN 9 IGF + QN Sbjct: 69 IGFGLEQN 76>NP_004937 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 IGFSVR 7 IGFS+R Sbjct: 1066 IGFSIR 1071>NP_003913 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IGFSVRQ 8 +GFS+RQ Sbjct: 2760 MGFSLRQ 2766Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.133 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,336 Number of extensions: 657 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |