Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002537 17 4312 XP_005253405 17 4312 NP_777601 17 4312 NP_002197 16 5631 NP_001138468 16 5631 XP_005268899 16 5631 XP_005268898 16 5631 XP_005268897 16 5631 XP_005268896 16 5631 NP_057289 16 7355 NP_056110 16 7355 NP_054784 16 7355 NP_001275879 16 7355 NP_077734 16 7355 XP_005258159 16 7355 XP_006722384 16 7355 XP_005245325 16 7355 XP_005245324 16 7355 NP_976076 15 9605 NP_000602 15 9605 NP_976074 15 9605 NP_001120695 15 9605 NP_001120698 15 9605 NP_001120699 15 9605 NP_976075 15 9605 NP_001120697 15 9605 NP_001272971 15 9605 NP_001272973 15 9605 NP_001272972 15 9605 NP_000007 15 9605 NP_001120800 15 9605 NP_008930 15 9605 NP_001165276 15 9605 NP_065136 15 9605 NP_982354 15 9605 NP_001136010 15 9605 NP_001136008 15 9605 XP_005266465 15 9605 XP_005266464 15 9605 XP_005266463 15 9605 XP_006714501 15 9605 XP_005248293 15 9605 XP_005248291 15 9605 NP_149092 15 9605 NP_001136009 15 9605 NP_001136007 15 9605>NP_002537 Length = 401 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+LL + Sbjct: 167 SVFGLLLTQ 175>XP_005253405 Length = 1463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIFGMLLV 8 SIFG+LL+ Sbjct: 1376 SIFGLLLL 1383>NP_777601 Length = 1453 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SIFGMLLV 8 SIFG+LL+ Sbjct: 1366 SIFGLLLL 1373>NP_002197 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>NP_001138468 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268899 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268898 Length = 1162 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268897 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>XP_005268896 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 +FG LLVE Sbjct: 18 LFGSLLVE 25>NP_057289 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SIFGMLLV 8 S+FG+LL+ Sbjct: 2 SLFGLLLL 9>NP_056110 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SIFGMLL 7 ++FGMLL Sbjct: 1825 TVFGMLL 1831>NP_054784 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FGMLLVE 9 FG+L+VE Sbjct: 661 FGLLMVE 667>NP_001275879 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FGMLLVE 9 FG+L+VE Sbjct: 686 FGLLMVE 692>NP_077734 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFGML+ E Sbjct: 294 IFGMLIGE 301>XP_005258159 Length = 1817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SIFGMLL 7 ++FGMLL Sbjct: 1637 TVFGMLL 1643>XP_006722384 Length = 1877 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SIFGMLL 7 ++FGMLL Sbjct: 1697 TVFGMLL 1703>XP_005245325 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFGML+ E Sbjct: 234 IFGMLIGE 241>XP_005245324 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFGML+ E Sbjct: 257 IFGMLIGE 264>NP_976076 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_000602 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_976074 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120695 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120698 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120699 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_976075 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001120697 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFGMLLV 8 +FG+LLV Sbjct: 9 LFGLLLV 15>NP_001272971 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FGMLLVE 9 FG LLVE Sbjct: 273 FGKLLVE 279>NP_001272973 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FGMLLVE 9 FG LLVE Sbjct: 120 FGKLLVE 126>NP_001272972 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FGMLLVE 9 FG LLVE Sbjct: 342 FGKLLVE 348>NP_000007 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FGMLLVE 9 FG LLVE Sbjct: 309 FGKLLVE 315>NP_001120800 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FGMLLVE 9 FG LLVE Sbjct: 313 FGKLLVE 319>NP_008930 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GMLLVE 9 GMLLVE Sbjct: 180 GMLLVE 185>NP_001165276 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GMLLVE 9 GMLLVE Sbjct: 180 GMLLVE 185>NP_065136 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+ +VE Sbjct: 186 SVFGLDIVE 194>NP_982354 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+ +VE Sbjct: 186 SVFGLDIVE 194>NP_001136010 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFG +LVE Sbjct: 110 IFGDILVE 117>NP_001136008 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFG +LVE Sbjct: 171 IFGDILVE 178>XP_005266465 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+ +VE Sbjct: 186 SVFGLDIVE 194>XP_005266464 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+ +VE Sbjct: 186 SVFGLDIVE 194>XP_005266463 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFGMLLVE 9 S+FG+ +VE Sbjct: 186 SVFGLDIVE 194>XP_006714501 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GMLLVE 9 GMLLVE Sbjct: 180 GMLLVE 185>XP_005248293 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GMLLVE 9 GMLLVE Sbjct: 137 GMLLVE 142>XP_005248291 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GMLLVE 9 GMLLVE Sbjct: 430 GMLLVE 435>NP_149092 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFG +LVE Sbjct: 171 IFGDILVE 178>NP_001136009 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFG +LVE Sbjct: 110 IFGDILVE 117>NP_001136007 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFGMLLVE 9 IFG +LVE Sbjct: 172 IFGDILVE 179Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.155 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,886 Number of extensions: 487 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |