Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 869 NP_000170 19 869 NP_001268422 19 869 NP_001268423 19 869 XP_005264328 19 869 NP_056508 16 5631 NP_057646 16 7355 NP_001277131 16 7355 NP_849191 16 7355 NP_001092105 16 7355 NP_998771 16 7355 NP_001136277 15 9605 NP_005620 15 9605 NP_115495 15 9605 NP_001371 15 9605 NP_001277152 15 9605 NP_005519 15 9605 NP_055043 15 9605 NP_001269665 15 9605 NP_001020016 15 9605 NP_001139807 15 9605 NP_060527 15 9605 NP_116201 15 9605 NP_877499 15 9605 NP_964012 15 9605 NP_008865 15 9605 NP_001248309 15 9605 NP_112195 15 9605 NP_059132 15 9605 XP_005261703 15 9605 XP_005261705 15 9605 XP_005261704 15 9605 XP_005261701 15 9605 XP_006724330 15 9605 XP_006724329 15 9605 XP_005261700 15 9605 XP_006724328 15 9605 XP_006718593 15 9605 XP_006718592 15 9605 XP_006713311 15 9605 XP_006713310 15 9605 XP_005264819 15 9605 XP_006713309 15 9605 XP_006710903 15 9605 XP_006710057 15 9605>NP_001268421 Length = 1230 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 S FFVELSE Sbjct: 1058 STFFVELSE 1066>NP_000170 Length = 1360 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 S FFVELSE Sbjct: 1188 STFFVELSE 1196>NP_001268422 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 S FFVELSE Sbjct: 886 STFFVELSE 894>NP_001268423 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 S FFVELSE Sbjct: 886 STFFVELSE 894>XP_005264328 Length = 1261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 S FFVELSE Sbjct: 1089 STFFVELSE 1097>NP_056508 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IFFVELSE 9 +F++ELSE Sbjct: 65 LFYLELSE 72>NP_057646 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 SIFFV+ S+ Sbjct: 504 SIFFVKSSD 512>NP_001277131 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFVELS 8 FFVELS Sbjct: 380 FFVELS 385>NP_849191 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFVELS 8 FFVELS Sbjct: 505 FFVELS 510>NP_001092105 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFVELS 8 FFVELS Sbjct: 505 FFVELS 510>NP_998771 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SIFFVE 6 SIFFVE Sbjct: 70 SIFFVE 75>NP_001136277 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_005620 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FFVELSE 9 FFVEL E Sbjct: 5464 FFVELYE 5470>NP_001371 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 S+F VE+S Sbjct: 1481 SVFMVEIS 1488>NP_001277152 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 S+F VE+S Sbjct: 1502 SVFMVEIS 1509>NP_005519 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FVELSE 9 FVELSE Sbjct: 76 FVELSE 81>NP_055043 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 90 LFFLELS 96>NP_001269665 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SIFFVE 6 SIFF+E Sbjct: 437 SIFFIE 442>NP_001020016 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 80 LFFMELS 86>NP_001139807 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 7 LFFLELS 13>NP_060527 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 114 LFFLELS 120>NP_116201 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SIFFVE 6 SIFF+E Sbjct: 486 SIFFIE 491>NP_877499 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 114 LFFLELS 120>NP_964012 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 153 LFFMELS 159>NP_008865 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 99 LFFMELS 105>NP_001248309 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 84 LFFMELS 90>NP_112195 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SIFFVELSE 9 S+FFV+ E Sbjct: 166 SVFFVKYEE 174>NP_059132 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_005261703 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_005261705 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_005261704 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_005261701 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_006724330 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_006724329 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_005261700 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_006724328 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SIFFVELSE 9 +IFF+E S+ Sbjct: 78 NIFFLETSD 86>XP_006718593 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FVELSE 9 FVELSE Sbjct: 76 FVELSE 81>XP_006718592 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FVELSE 9 FVELSE Sbjct: 76 FVELSE 81>XP_006713311 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 SIFF+E S Sbjct: 185 SIFFLERS 192>XP_006713310 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 SIFF+E S Sbjct: 284 SIFFLERS 291>XP_005264819 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 SIFF+E S Sbjct: 397 SIFFLERS 404>XP_006713309 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SIFFVELS 8 SIFF+E S Sbjct: 397 SIFFLERS 404>XP_006710903 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 +FF+ELS Sbjct: 153 LFFMELS 159>XP_006710057 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IFFVELS 8 IFF+E+S Sbjct: 47 IFFLEIS 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.144 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 318,146 Number of extensions: 229 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |