Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 665 XP_006717989 19 665 NP_001257436 16 5631 NP_001257437 16 5631 NP_006281 16 5631 NP_001273148 16 5631 NP_443139 16 5631 NP_001182119 16 5631 XP_006724596 16 5631 XP_006719284 16 5631 XP_006719283 16 5631 XP_006719282 16 5631 XP_006715618 16 5631 XP_005267176 16 5631 NP_073624 16 7355 NP_001276015 16 7355 NP_001276016 16 7355 NP_620587 16 7355 NP_001276013 16 7355 NP_001276014 16 7355 NP_001276011 16 7355 NP_001276012 16 7355 XP_006721506 16 7355 XP_005256500 16 7355 XP_006721505 16 7355 XP_006721504 16 7355 XP_006719760 16 7355 XP_006719759 16 7355 XP_006719758 16 7355 XP_005254048 16 7355 XP_006719757 16 7355 XP_006710887 16 7355 NP_998762 16 7355 NP_997194 16 7355 NP_004071 15 9605 NP_663733 15 9605 NP_254273 15 9605 NP_003277 15 9605 NP_443195 15 9605 NP_001245375 15 9605 NP_001245376 15 9605 NP_919263 15 9605 XP_006720117 15 9605 XP_006720116 15 9605 XP_005267417 15 9605 XP_005250839 15 9605 XP_005250838 15 9605 XP_005250837 15 9605 XP_005249688 15 9605 XP_005249687 15 9605 XP_005249686 15 9605 XP_005249685 15 9605>NP_000305 Length = 403 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIERAGNDK 9 SIERA NDK Sbjct: 305 SIERADNDK 313>XP_006717989 Length = 388 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SIERAGNDK 9 SIERA NDK Sbjct: 290 SIERADNDK 298>NP_001257436 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SIERAGND 8 S RAGND Sbjct: 578 SCHRAGND 585>NP_001257437 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SIERAGND 8 S RAGND Sbjct: 578 SCHRAGND 585>NP_006281 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SIERAGND 8 S RAGND Sbjct: 578 SCHRAGND 585>NP_001273148 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIERAGNDK 9 SIER GN + Sbjct: 329 SIEREGNQE 337>NP_443139 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIERAGNDK 9 SIER GN + Sbjct: 817 SIEREGNQE 825>NP_001182119 Length = 177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E+ GND Sbjct: 114 SLEKPGND 121>XP_006724596 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S++RAG D Sbjct: 290 SVDRAGKD 297>XP_006719284 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIERAGNDK 9 SIER GN + Sbjct: 415 SIEREGNQE 423>XP_006719283 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIERAGNDK 9 SIER GN + Sbjct: 707 SIEREGNQE 715>XP_006719282 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SIERAGNDK 9 SIER GN + Sbjct: 707 SIEREGNQE 715>XP_006715618 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SIERAGND 8 S RAGND Sbjct: 365 SCHRAGND 372>XP_005267176 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SIERAGND 8 S RAGND Sbjct: 578 SCHRAGND 585>NP_073624 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 + RAGND Sbjct: 186 VTRAGND 192>NP_001276015 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 113 IEKTGND 119>NP_001276016 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 110 IEKTGND 116>NP_620587 Length = 290 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 110 IEKTGND 116>NP_001276013 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 110 IEKTGND 116>NP_001276014 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 113 IEKTGND 119>NP_001276011 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 113 IEKTGND 119>NP_001276012 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 IE+ GND Sbjct: 110 IEKTGND 116>XP_006721506 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERAGND 8 +RAGND Sbjct: 4 QRAGND 9>XP_005256500 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERAGND 8 +RAGND Sbjct: 52 QRAGND 57>XP_006721505 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERAGND 8 +RAGND Sbjct: 86 QRAGND 91>XP_006721504 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERAGND 8 +RAGND Sbjct: 86 QRAGND 91>XP_006719760 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 297 LERQGHDK 304>XP_006719759 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 297 LERQGHDK 304>XP_006719758 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 297 LERQGHDK 304>XP_005254048 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 293 LERQGHDK 300>XP_006719757 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 297 LERQGHDK 304>XP_006710887 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IERAGND 8 + RAGND Sbjct: 186 VTRAGND 192>NP_998762 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ERAGND 8 +RAGND Sbjct: 86 QRAGND 91>NP_997194 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 +ER G+DK Sbjct: 293 LERQGHDK 300>NP_004071 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 686 IEKKGSDK 693>NP_663733 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 686 IEKKGSDK 693>NP_254273 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E+AG D Sbjct: 157 SVEKAGMD 164>NP_003277 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 488 RAGNEK 493>NP_443195 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 324 RAGNEK 329>NP_001245375 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 226 RAGNEK 231>NP_001245376 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 226 RAGNEK 231>NP_919263 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E +GND Sbjct: 194 SLELSGND 201>XP_006720117 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E +GND Sbjct: 102 SLELSGND 109>XP_006720116 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E +GND Sbjct: 102 SLELSGND 109>XP_005267417 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SIERAGND 8 S+E +GND Sbjct: 177 SLELSGND 184>XP_005250839 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 364 RAGNEK 369>XP_005250838 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 324 RAGNEK 329>XP_005250837 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAGNDK 9 RAGN+K Sbjct: 364 RAGNEK 369>XP_005249688 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 667 IEKKGSDK 674>XP_005249687 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 679 IEKKGSDK 686>XP_005249686 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 685 IEKKGSDK 692>XP_005249685 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IERAGNDK 9 IE+ G+DK Sbjct: 686 IEKKGSDK 693Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.123 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 638,696 Number of extensions: 1089 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |