Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 XP_006717989 20 299 NP_150375 18 1935 NP_775185 18 1935 NP_064716 17 3301 NP_064450 17 3301 XP_005248794 17 3301 XP_005248793 17 3301 XP_005248792 17 3301 XP_005273257 17 3301 NP_077005 17 4312 NP_060101 17 4312 XP_005272414 17 4312 NP_001155155 16 5631 NP_733764 16 5631 NP_653273 16 5631 NP_683513 16 5631 XP_006718298 16 5631 XP_006718297 16 5631 XP_005252987 16 5631 XP_005252986 16 5631 XP_006718296 16 5631 XP_005248382 16 5631 NP_006209 16 7355 NP_001012985 16 7355 NP_075053 16 7355 NP_115818 16 7355 NP_001005408 16 7355 XP_005252487 16 7355 XP_006714735 16 7355 XP_005248626 16 7355 XP_005263404 16 7355 XP_005263403 16 7355 XP_006714474 16 7355 XP_006714473 16 7355 XP_006714472 16 7355 XP_005263402 16 7355 XP_005263401 16 7355 XP_005263399 16 7355 XP_005263400 16 7355 XP_006714471 16 7355 XP_005263398 16 7355 XP_006713721 16 7355 NP_001272369 15 9605 NP_689969 15 9605 NP_001272368 15 9605 NP_001093869 15 9605 NP_056332 15 9605 NP_001093870 15 9605 NP_008824 15 9605 NP_002556 15 9605 NP_002371 15 9605 NP_085072 15 9605 NP_001230188 15 9605 NP_945322 15 9605 XP_006718877 15 9605 XP_006718876 15 9605 XP_005250977 15 9605 XP_005248335 15 9605 XP_006714526 15 9605 XP_005262709 15 9605 XP_006711259 15 9605 XP_005277566 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SICSIKRAD 9 SICSI+RAD Sbjct: 302 SICSIERAD 310>XP_006717989 Length = 388 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SICSIKRAD 9 SICSI+RAD Sbjct: 287 SICSIERAD 295>NP_150375 Length = 1196 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SICSIKRA 8 S+CSI+RA Sbjct: 266 SLCSIRRA 273>NP_775185 Length = 732 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SICSIKRA 8 S+CSI+RA Sbjct: 266 SLCSIRRA 273>NP_064716 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 SIC++ R+D Sbjct: 309 SICTVMRSD 317>NP_064450 Length = 1722 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SICSIKR 7 SICSI+R Sbjct: 1463 SICSIRR 1469>XP_005248794 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 SIC++ R+D Sbjct: 134 SICTVMRSD 142>XP_005248793 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 SIC++ R+D Sbjct: 134 SICTVMRSD 142>XP_005248792 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 SIC++ R+D Sbjct: 134 SICTVMRSD 142>XP_005273257 Length = 1726 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SICSIKR 7 SICSI+R Sbjct: 1467 SICSIRR 1473>NP_077005 Length = 432 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 S+CS+ +AD Sbjct: 149 SLCSVLQAD 157>NP_060101 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 +CSIK D Sbjct: 990 VCSIKHGD 997>XP_005272414 Length = 791 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 ++CS+K AD Sbjct: 717 TVCSLKFAD 725>NP_001155155 Length = 1060 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 + CS+KR D Sbjct: 382 AFCSMKRKD 390>NP_733764 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 + CS+KR D Sbjct: 137 AFCSMKRKD 145>NP_653273 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 + CS+KR D Sbjct: 461 AFCSMKRKD 469>NP_683513 Length = 127 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 ++C I+RAD Sbjct: 47 NMCRIQRAD 55>XP_006718298 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 S CS K+AD Sbjct: 224 STCSKKKAD 232>XP_006718297 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 S CS K+AD Sbjct: 224 STCSKKKAD 232>XP_005252987 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 S CS K+AD Sbjct: 267 STCSKKKAD 275>XP_005252986 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 S CS K+AD Sbjct: 267 STCSKKKAD 275>XP_006718296 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 S CS K+AD Sbjct: 267 STCSKKKAD 275>XP_005248382 Length = 117 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SICSIKRAD 9 ++C I+RAD Sbjct: 47 NMCRIQRAD 55>NP_006209 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 SICS+K Sbjct: 405 SICSVK 410>NP_001012985 Length = 1706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>NP_075053 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 SICS+K Sbjct: 290 SICSVK 295>NP_115818 Length = 1562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SICSIKRA 8 S C++KRA Sbjct: 1206 SACALKRA 1213>NP_001005408 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SICSIKRA 8 S C++KRA Sbjct: 1204 SACALKRA 1211>XP_005252487 Length = 919 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 IC +RAD Sbjct: 7 ICKTRRAD 14>XP_006714735 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 SICS+K Sbjct: 290 SICSVK 295>XP_005248626 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 SICS+K Sbjct: 249 SICSVK 254>XP_005263404 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263403 Length = 1672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_006714474 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 938 ICSVKHDD 945>XP_006714473 Length = 1675 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 938 ICSVKHDD 945>XP_006714472 Length = 1706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263402 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263401 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263399 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263400 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_006714471 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_005263398 Length = 1707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICSIKRAD 9 ICS+K D Sbjct: 970 ICSVKHDD 977>XP_006713721 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 SICS+K Sbjct: 405 SICSVK 410>NP_001272369 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 ++CS+K D Sbjct: 402 NLCSLKNQD 410>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 ++CS+K D Sbjct: 687 NLCSLKNQD 695>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 ++CS+K D Sbjct: 687 NLCSLKNQD 695>NP_001093869 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 CS K+AD Sbjct: 581 CSCKQAD 587>NP_056332 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 S+CSIK Sbjct: 325 SLCSIK 330>NP_001093870 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 CS K+AD Sbjct: 581 CSCKQAD 587>NP_008824 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 C +K+AD Sbjct: 278 CRVKKAD 284>NP_002556 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SICSIKRAD 9 S CS RAD Sbjct: 355 SSCSTPRAD 363>NP_002371 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SICSIKRAD 9 S C KRAD Sbjct: 49 SSCENKRAD 57>NP_085072 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SICSIKRAD 9 S C KRAD Sbjct: 49 SSCENKRAD 57>NP_001230188 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 S+CSIK Sbjct: 325 SLCSIK 330>NP_945322 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 S+CSIK Sbjct: 325 SLCSIK 330>XP_006718877 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 S+CSIK Sbjct: 78 SLCSIK 83>XP_006718876 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SICSIK 6 S+CSIK Sbjct: 119 SLCSIK 124>XP_005250977 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SICSIKRAD 9 S C KRAD Sbjct: 49 SSCENKRAD 57>XP_005248335 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 ++CS+K D Sbjct: 402 NLCSLKNQD 410>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SICSIKRAD 9 ++CS+K D Sbjct: 687 NLCSLKNQD 695>XP_005262709 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 CS K+AD Sbjct: 581 CSCKQAD 587>XP_006711259 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 C +K+AD Sbjct: 128 CRVKKAD 134>XP_005277566 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CSIKRAD 9 C +K+AD Sbjct: 278 CRVKKAD 284Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.130 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 697,256 Number of extensions: 1185 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |