Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005912                                                              20     509
XP_005248577                                                           20     509
XP_005248576                                                           20     509
NP_004781                                                              18    1135
NP_695008                                                              18    1135
NP_695010                                                              18    1135
NP_695009                                                              18    1135
NP_996744                                                              16    5631
NP_008928                                                              16    5631
NP_996742                                                              16    5631
NP_055445                                                              16    5631
XP_005255053                                                           16    5631
XP_006717622                                                           16    5631
XP_006717621                                                           16    5631
XP_006717620                                                           16    5631
XP_006717619                                                           16    5631
XP_006717618                                                           16    5631
XP_005269456                                                           16    5631
XP_006717617                                                           16    5631
XP_006717616                                                           16    5631
XP_006717615                                                           16    5631
XP_005269454                                                           16    5631
XP_005269453                                                           16    5631
XP_006717614                                                           16    5631
XP_006717613                                                           16    5631
XP_006717612                                                           16    5631
XP_005269452                                                           16    5631
XP_005269451                                                           16    5631
XP_006717611                                                           16    5631
XP_005269450                                                           16    5631
XP_005269449                                                           16    5631
XP_005269448                                                           16    5631
XP_005269447                                                           16    5631
XP_005269446                                                           16    5631
XP_005269445                                                           16    5631
NP_996743                                                              16    5631
NP_003257                                                              16    7355
NP_612564                                                              16    7355
NP_006059                                                              16    7355
NP_569733                                                              16    7355
NP_904324                                                              16    7355
NP_004845                                                              16    7355
NP_001191957                                                           16    7355
NP_059136                                                              16    7355
NP_853556                                                              16    7355
NP_001193730                                                           16    7355
NP_031396                                                              16    7355
NP_001078920                                                           16    7355
NP_006819                                                              16    7355
XP_005268209                                                           16    7355
XP_005268208                                                           16    7355
XP_006719745                                                           16    7355
XP_006719744                                                           16    7355
XP_005254044                                                           16    7355
XP_005269084                                                           16    7355
XP_005269083                                                           16    7355
XP_006715385                                                           16    7355
XP_005262694                                                           16    7355
XP_005262693                                                           16    7355
XP_003403793                                                           16    7355
NP_001172078                                                           16    7355
NP_001104789                                                           16    7355
NP_003805                                                              16    7355
NP_001360                                                              15    9605
NP_001230526                                                           15    9605
NP_001171559                                                           15    9605
NP_065969                                                              15    9605
NP_001231878                                                           15    9605
NP_009115                                                              15    9605
NP_058648                                                              15    9605
NP_787954                                                              15    9605
NP_003889                                                              15    9605
NP_059130                                                              15    9605
NP_001139659                                                           15    9605
NP_001139658                                                           15    9605
NP_001139656                                                           15    9605
NP_006201                                                              15    9605
NP_001139657                                                           15    9605
NP_056178                                                              15    9605
NP_001139799                                                           15    9605
NP_001139798                                                           15    9605
NP_006659                                                              15    9605
NP_060549                                                              15    9605
XP_005260116                                                           15    9605
XP_005260115                                                           15    9605
XP_006722936                                                           15    9605
XP_005254520                                                           15    9605
XP_005267331                                                           15    9605
XP_005270056                                                           15    9605
XP_005270055                                                           15    9605
XP_005267256                                                           15    9605
XP_005267255                                                           15    9605
XP_006715655                                                           15    9605
XP_005267254                                                           15    9605
XP_006715654                                                           15    9605
XP_005248319                                                           15    9605
XP_006713018                                                           15    9605
XP_005264896                                                           15    9605
XP_005264455                                                           15    9605
>NP_005912
          Length = 1512

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           S NTIQKFV
Sbjct: 404 SRNTIQKFV 412
>XP_005248577
          Length = 1349

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           S NTIQKFV
Sbjct: 241 SRNTIQKFV 249
>XP_005248576
          Length = 1375

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           S NTIQKFV
Sbjct: 267 SRNTIQKFV 275
>NP_004781
          Length = 563

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  SHNTIQKF 8
          SHNT+Q F
Sbjct: 33 SHNTLQNF 40
>NP_695008
          Length = 550

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  SHNTIQKF 8
          SHNT+Q F
Sbjct: 33 SHNTLQNF 40
>NP_695010
          Length = 519

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  SHNTIQKF 8
          SHNT+Q F
Sbjct: 33 SHNTLQNF 40
>NP_695009
          Length = 506

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  SHNTIQKF 8
          SHNT+Q F
Sbjct: 33 SHNTLQNF 40
>NP_996744
          Length = 2948

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2807 SHQTVQQLV 2815
>NP_008928
          Length = 1026

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 885 SHQTVQQLV 893
>NP_996742
          Length = 996

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 855 SHQTVQQLV 863
>NP_055445
          Length = 1267

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1    SHNTIQKF 8
            +H+T++KF
Sbjct: 1035 NHDTVKKF 1042
>XP_005255053
          Length = 1267

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1    SHNTIQKF 8
            +H+T++KF
Sbjct: 1035 NHDTVKKF 1042
>XP_006717622
          Length = 652

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 511 SHQTVQQLV 519
>XP_006717621
          Length = 652

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 511 SHQTVQQLV 519
>XP_006717620
          Length = 652

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 511 SHQTVQQLV 519
>XP_006717619
          Length = 652

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 511 SHQTVQQLV 519
>XP_006717618
          Length = 2826

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2685 SHQTVQQLV 2693
>XP_005269456
          Length = 2846

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2705 SHQTVQQLV 2713
>XP_006717617
          Length = 2887

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2746 SHQTVQQLV 2754
>XP_006717616
          Length = 2891

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2750 SHQTVQQLV 2758
>XP_006717615
          Length = 2903

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2762 SHQTVQQLV 2770
>XP_005269454
          Length = 2912

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2771 SHQTVQQLV 2779
>XP_005269453
          Length = 2922

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2781 SHQTVQQLV 2789
>XP_006717614
          Length = 2938

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2797 SHQTVQQLV 2805
>XP_006717613
          Length = 2948

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2807 SHQTVQQLV 2815
>XP_006717612
          Length = 2950

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2809 SHQTVQQLV 2817
>XP_005269452
          Length = 2954

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2813 SHQTVQQLV 2821
>XP_005269451
          Length = 2957

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2816 SHQTVQQLV 2824
>XP_006717611
          Length = 2964

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2823 SHQTVQQLV 2831
>XP_005269450
          Length = 2968

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2827 SHQTVQQLV 2835
>XP_005269449
          Length = 2969

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2828 SHQTVQQLV 2836
>XP_005269448
          Length = 2979

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2838 SHQTVQQLV 2846
>XP_005269447
          Length = 2980

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2839 SHQTVQQLV 2847
>XP_005269446
          Length = 2999

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2858 SHQTVQQLV 2866
>XP_005269445
          Length = 2999

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SHNTIQKFV 9
            SH T+Q+ V
Sbjct: 2858 SHQTVQQLV 2866
>NP_996743
          Length = 1094

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           SH T+Q+ V
Sbjct: 953 SHQTVQQLV 961
>NP_003257
          Length = 799

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   SHNTIQKF 8
           +HN IQ F
Sbjct: 118 AHNLIQSF 125
>NP_612564
          Length = 839

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   SHNTIQKF 8
           +HN IQ F
Sbjct: 158 AHNLIQSF 165
>NP_006059
          Length = 796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SHN +QK
Sbjct: 108 SHNQLQK 114
>NP_569733
          Length = 1068

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH+ ++KF+
Sbjct: 280 SHDMLRKFI 288
>NP_904324
          Length = 1068

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH+ ++KF+
Sbjct: 280 SHDMLRKFI 288
>NP_004845
          Length = 356

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   SHNTIQKFV 9
           SH  + KFV
Sbjct: 101 SHTPVSKFV 109
>NP_001191957
          Length = 679

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SH T+QK
Sbjct: 363 SHKTLQK 369
>NP_059136
          Length = 714

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SH T+QK
Sbjct: 398 SHKTLQK 404
>NP_853556
          Length = 319

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  NTIQKFV 9
          +TIQKF+
Sbjct: 21 STIQKFI 27
>NP_001193730
          Length = 337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  NTIQKFV 9
          +TIQKF+
Sbjct: 42 STIQKFI 48
>NP_031396
          Length = 340

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  NTIQKFV 9
          +TIQKF+
Sbjct: 42 STIQKFI 48
>NP_001078920
          Length = 178

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SHNTIQKF 8
           SH+ I+KF
Sbjct: 104 SHSKIEKF 111
>NP_006819
          Length = 2202

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    SHNTIQKFV 9
            SH+++ KF+
Sbjct: 1776 SHDSVNKFL 1784
>XP_005268209
          Length = 776

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   HNTIQKF 8
           H+T+Q+F
Sbjct: 628 HSTVQQF 634
>XP_005268208
          Length = 776

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   HNTIQKF 8
           H+T+Q+F
Sbjct: 628 HSTVQQF 634
>XP_006719745
          Length = 1043

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH+ ++KF+
Sbjct: 280 SHDMLRKFI 288
>XP_006719744
          Length = 1044

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH+ ++KF+
Sbjct: 280 SHDMLRKFI 288
>XP_005254044
          Length = 1068

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH+ ++KF+
Sbjct: 280 SHDMLRKFI 288
>XP_005269084
          Length = 622

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SH T+QK
Sbjct: 306 SHKTLQK 312
>XP_005269083
          Length = 724

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SH T+QK
Sbjct: 408 SHKTLQK 414
>XP_006715385
          Length = 1866

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    SHNTIQKFV 9
            SH+++ KF+
Sbjct: 1440 SHDSVNKFL 1448
>XP_005262694
          Length = 796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SHN +QK
Sbjct: 108 SHNQLQK 114
>XP_005262693
          Length = 796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   SHNTIQK 7
           SHN +QK
Sbjct: 108 SHNQLQK 114
>XP_003403793
          Length = 846

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   HNTIQKFV 9
           +NT+QK++
Sbjct: 450 NNTVQKYL 457
>NP_001172078
          Length = 220

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   SHNTIQKF 8
           +H T+Q+F
Sbjct: 141 AHKTVQEF 148
>NP_001104789
          Length = 220

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   SHNTIQKF 8
           +H T+Q+F
Sbjct: 141 AHKTVQEF 148
>NP_003805
          Length = 776

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   HNTIQKF 8
           H+T+Q+F
Sbjct: 628 HSTVQQF 634
>NP_001360
          Length = 4624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HNTIQKFV 9
           HN ++KF+
Sbjct: 548 HNELRKFM 555
>NP_001230526
          Length = 1287

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    NTIQKF 8
            NTIQK+
Sbjct: 995  NTIQKY 1000
>NP_001171559
          Length = 1259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   NTIQKFV 9
           NT+Q F+
Sbjct: 157 NTVQSFI 163
>NP_065969
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   HNTIQKFV 9
           H T+ KF+
Sbjct: 644 HETVGKFI 651
>NP_001231878
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   HNTIQKFV 9
           H T+ KF+
Sbjct: 644 HETVGKFI 651
>NP_009115
          Length = 1504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH ++Q+F+
Sbjct: 827 SHTSLQEFL 835
>NP_058648
          Length = 1264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    NTIQKF 8
            NTIQK+
Sbjct: 995  NTIQKY 1000
>NP_787954
          Length = 1551

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 2    HNTIQKF 8
            H T+Q+F
Sbjct: 1028 HQTVQQF 1034
>NP_003889
          Length = 1496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   NTIQKFV 9
           NT+Q F+
Sbjct: 394 NTVQSFI 400
>NP_059130
          Length = 1551

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 2    HNTIQKF 8
            H T+Q+F
Sbjct: 1028 HQTVQQF 1034
>NP_001139659
          Length = 1464

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 116 HNTIQ 120
>NP_001139658
          Length = 1588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 241 HNTIQ 245
>NP_001139656
          Length = 1588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 241 HNTIQ 245
>NP_006201
          Length = 1588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 241 HNTIQ 245
>NP_001139657
          Length = 1462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 115 HNTIQ 119
>NP_056178
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 116 HNTIQ 120
>NP_001139799
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 116 HNTIQ 120
>NP_001139798
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   HNTIQ 6
           HNTIQ
Sbjct: 116 HNTIQ 120
>NP_006659
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHNTIQKFV 9
           S NT+ KF+
Sbjct: 225 SRNTLAKFL 233
>NP_060549
          Length = 995

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HNTIQK 7
           H+TIQK
Sbjct: 279 HSTIQK 284
>XP_005260116
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH++IQ+ V
Sbjct: 189 SHSSIQRHV 197
>XP_005260115
          Length = 566

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH++IQ+ V
Sbjct: 203 SHSSIQRHV 211
>XP_006722936
          Length = 569

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH++IQ+ V
Sbjct: 206 SHSSIQRHV 214
>XP_005254520
          Length = 1235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 2   HNTIQKF 8
           H T+Q+F
Sbjct: 712 HQTVQQF 718
>XP_005267331
          Length = 355

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  SHNTIQKFV 9
          S NT+ KF+
Sbjct: 80 SRNTLAKFL 88
>XP_005270056
          Length = 789

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   HNTIQKFV 9
           H T+ KF+
Sbjct: 644 HETVGKFI 651
>XP_005270055
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   HNTIQKFV 9
           H T+ KF+
Sbjct: 644 HETVGKFI 651
>XP_005267256
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3  NTIQKFV 9
          NT+Q F+
Sbjct: 11 NTVQSFI 17
>XP_005267255
          Length = 1165

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3  NTIQKFV 9
          NT+Q F+
Sbjct: 63 NTVQSFI 69
>XP_006715655
          Length = 1288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   NTIQKFV 9
           NT+Q F+
Sbjct: 394 NTVQSFI 400
>XP_005267254
          Length = 1443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   NTIQKFV 9
           NT+Q F+
Sbjct: 341 NTVQSFI 347
>XP_006715654
          Length = 1495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   NTIQKFV 9
           NT+Q F+
Sbjct: 393 NTVQSFI 399
>XP_005248319
          Length = 4609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   HNTIQKFV 9
           HN ++KF+
Sbjct: 533 HNELRKFM 540
>XP_006713018
          Length = 998

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH ++Q+F+
Sbjct: 321 SHTSLQEFL 329
>XP_005264896
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   SHNTIQKFV 9
           SH ++Q+F+
Sbjct: 436 SHTSLQEFL 444
>XP_005264455
          Length = 671

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HNTIQK 7
           H+TIQK
Sbjct: 279 HSTIQK 284
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.127    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 438,947
Number of extensions: 673
Number of successful extensions: 99
Number of sequences better than 10000.0: 99
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 99
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package