Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001242941 17 4312 NP_077816 17 4312 NP_005955 17 4312 NP_001243024 17 4312 XP_005256710 17 4312 XP_005256709 17 4312 XP_005256708 17 4312 XP_006720682 17 4312 XP_005268318 17 4312 NP_055318 16 5631 NP_006050 16 5631 XP_006719406 16 5631 XP_006718277 16 5631 XP_006718275 16 5631 XP_006718274 16 5631 XP_006718272 16 5631 NP_003635 16 7355 NP_958836 16 7355 NP_958839 16 7355 NP_001124303 16 7355 NP_055791 16 7355 NP_113674 16 7355 NP_001248389 16 7355 NP_001007102 16 7355 NP_001248387 16 7355 NP_001269461 16 7355 NP_056154 16 7355 NP_001248388 16 7355 NP_001269460 16 7355 NP_060009 16 7355 NP_852107 16 7355 NP_056518 16 7355 XP_006723822 16 7355 XP_005256892 16 7355 XP_005256891 16 7355 XP_005256890 16 7355 XP_005256888 16 7355 XP_005256889 16 7355 XP_006721125 16 7355 XP_005269704 16 7355 XP_006717362 16 7355 XP_005252310 16 7355 NP_060509 15 9605 NP_001239264 15 9605 NP_060388 15 9605 NP_001258875 15 9605 NP_001138608 15 9605 NP_689451 15 9605 NP_001138606 15 9605 NP_003053 15 9605 NP_001138607 15 9605 NP_001138609 15 9605 NP_689452 15 9605 NP_004368 15 9605 NP_001129201 15 9605 NP_001129204 15 9605 NP_005479 15 9605 NP_001129202 15 9605 NP_065757 15 9605 NP_001138917 15 9605 NP_001138916 15 9605 NP_000479 15 9605 NP_116255 15 9605 XP_005261074 15 9605 XP_006724099 15 9605 XP_006724098 15 9605 XP_005254784 15 9605 XP_005254783 15 9605 XP_006714309 15 9605 XP_005245255 15 9605>NP_001242941 Length = 2007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1402 SQLADTKKK 1410>NP_077816 Length = 1499 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 HLAD+R K Sbjct: 58 HLADNRLK 65>NP_005955 Length = 1976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1371 SQLADTKKK 1379>NP_001243024 Length = 1985 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1380 SQLADTKKK 1388>XP_005256710 Length = 1986 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1381 SQLADTKKK 1389>XP_005256709 Length = 1997 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1392 SQLADTKKK 1400>XP_005256708 Length = 2007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SHLADSRKK 9 S LAD++KK Sbjct: 1402 SQLADTKKK 1410>XP_006720682 Length = 803 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 HLAD+R K Sbjct: 58 HLADNRLK 65>XP_005268318 Length = 1499 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 HLAD+R K Sbjct: 58 HLADNRLK 65>NP_055318 Length = 2785 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH+ D R+K Sbjct: 1131 SHILDQREK 1139>NP_006050 Length = 1575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LADSRKK 9 LAD+RKK Sbjct: 1370 LADTRKK 1376>XP_006719406 Length = 2380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH+ D R+K Sbjct: 1131 SHILDQREK 1139>XP_006718277 Length = 805 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SHLADS 6 SHLADS Sbjct: 334 SHLADS 339>XP_006718275 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SHLADS 6 SHLADS Sbjct: 334 SHLADS 339>XP_006718274 Length = 811 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SHLADS 6 SHLADS Sbjct: 242 SHLADS 247>XP_006718272 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SHLADS 6 SHLADS Sbjct: 334 SHLADS 339>NP_003635 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 181 HIADLRKQ 188>NP_958836 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 261 HIADLRKQ 268>NP_958839 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 321 HIADLRKQ 328>NP_001124303 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 257 HIADLRKQ 264>NP_055791 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SHLADSR 7 SHL+DS+ Sbjct: 397 SHLSDSK 403>NP_113674 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 166 THLVSSRKR 174>NP_001248389 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 130 THLVSSRKR 138>NP_001007102 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 130 THLVSSRKR 138>NP_001248387 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 168 THLVSSRKR 176>NP_001269461 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH ++ RKK Sbjct: 802 SHFSNKRKK 810>NP_056154 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH ++ RKK Sbjct: 802 SHFSNKRKK 810>NP_001248388 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 130 THLVSSRKR 138>NP_001269460 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH ++ RKK Sbjct: 802 SHFSNKRKK 810>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ADSRKK 9 ADSRKK Sbjct: 1969 ADSRKK 1974>NP_852107 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH ++ RKK Sbjct: 802 SHFSNKRKK 810>NP_056518 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HLADSRKK 9 HLA RKK Sbjct: 253 HLAQLRKK 260>XP_006723822 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 SH ++ RKK Sbjct: 811 SHFSNKRKK 819>XP_005256892 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256891 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256890 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256888 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 257 HIADLRKQ 264>XP_005256889 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 H+AD RK+ Sbjct: 257 HIADLRKQ 264>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ADSRKK 9 ADSRKK Sbjct: 1923 ADSRKK 1928>XP_005269704 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SHLADSR 7 SHL+DS+ Sbjct: 397 SHLSDSK 403>XP_006717362 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 145 THLVSSRKR 153>XP_005252310 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 +HL SRK+ Sbjct: 183 THLVSSRKR 191>NP_060509 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 HLA+S+K Sbjct: 103 HLANSKK 109>NP_001239264 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SHLADSRKK 9 SHL D R + Sbjct: 1053 SHLKDDRSR 1061>NP_060388 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 HL +S+KK Sbjct: 176 HLEESQKK 183>NP_001258875 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLADSRK 8 HL+DS K Sbjct: 978 HLSDSHK 984>NP_001138608 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_689451 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_001138606 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 294 HLSDSR 299>NP_003053 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HLADSRK 8 HL+DS K Sbjct: 971 HLSDSHK 977>NP_001138607 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_001138609 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_689452 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_004368 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HL+DSR Sbjct: 328 HLSDSR 333>NP_001129201 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 S LAD RK+ Sbjct: 342 SSLADQRKE 350>NP_001129204 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 S LAD RK+ Sbjct: 375 SSLADQRKE 383>NP_005479 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 S LAD RK+ Sbjct: 375 SSLADQRKE 383>NP_001129202 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHLADSRKK 9 S LAD RK+ Sbjct: 330 SSLADQRKE 338>NP_065757 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 427 HMSDNRK 433>NP_001138917 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 427 HMSDNRK 433>NP_001138916 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 412 HMSDNRK 418>NP_000479 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HLADS+ Sbjct: 97 HLADSK 102>NP_116255 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SHLADSRKK 9 SHL D R + Sbjct: 1053 SHLKDDRSR 1061>XP_005261074 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 368 HMSDNRK 374>XP_006724099 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 427 HMSDNRK 433>XP_006724098 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLADSRK 8 H++D+RK Sbjct: 427 HMSDNRK 433>XP_005254784 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SHLADSRKK 9 SHL D R + Sbjct: 1053 SHLKDDRSR 1061>XP_005254783 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SHLADSRKK 9 SHL D R + Sbjct: 1053 SHLKDDRSR 1061>XP_006714309 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLADSRKK 9 HL +S+KK Sbjct: 147 HLEESQKK 154>XP_005245255 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLADSR 7 HLADS+ Sbjct: 49 HLADSK 54Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.115 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 656,107 Number of extensions: 1337 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |