Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              20     509
XP_006716142                                                           20     509
XP_005250088                                                           20     509
XP_006716141                                                           20     509
XP_005250085                                                           20     509
XP_006716140                                                           20     509
XP_005250084                                                           20     509
XP_005250083                                                           20     509
XP_005250082                                                           20     509
NP_055737                                                              17    3301
NP_127497                                                              17    3301
NP_127500                                                              17    3301
NP_127499                                                              17    3301
NP_056340                                                              17    4312
NP_001273768                                                           17    4312
NP_005757                                                              17    4312
NP_000821                                                              17    4312
NP_783300                                                              17    4312
XP_005261001                                                           17    4312
XP_005261000                                                           17    4312
XP_005260999                                                           17    4312
XP_006724054                                                           17    4312
XP_006719976                                                           17    4312
XP_006715518                                                           17    4312
XP_006715517                                                           17    4312
XP_006715516                                                           17    4312
NP_001171601                                                           16    5631
NP_001954                                                              16    5631
NP_001171602                                                           16    5631
NP_061836                                                              16    5631
NP_001269789                                                           16    5631
NP_055449                                                              16    5631
NP_001269787                                                           16    5631
NP_997278                                                              16    5631
NP_001269785                                                           16    5631
NP_387505                                                              16    5631
NP_055162                                                              16    5631
XP_005261051                                                           16    5631
XP_005258975                                                           16    5631
XP_005258974                                                           16    5631
XP_005258973                                                           16    5631
XP_005258972                                                           16    5631
XP_005258971                                                           16    5631
XP_006723194                                                           16    5631
XP_006723193                                                           16    5631
XP_005258770                                                           16    5631
XP_006723192                                                           16    5631
XP_006719692                                                           16    5631
XP_006719691                                                           16    5631
XP_005262859                                                           16    5631
XP_005262858                                                           16    5631
XP_005262857                                                           16    5631
XP_005262856                                                           16    5631
XP_006714188                                                           16    5631
XP_006714187                                                           16    5631
XP_005262855                                                           16    5631
XP_005262854                                                           16    5631
XP_005262853                                                           16    5631
XP_005245343                                                           16    5631
XP_005245341                                                           16    5631
XP_006711459                                                           16    5631
XP_005245340                                                           16    5631
XP_006711458                                                           16    5631
XP_006711457                                                           16    5631
XP_006711456                                                           16    5631
NP_065197                                                              16    7355
NP_001137532                                                           16    7355
NP_057683                                                              16    7355
NP_001005283                                                           16    7355
NP_001014364                                                           16    7355
NP_060249                                                              16    7355
NP_001107592                                                           16    7355
XP_005267120                                                           16    7355
XP_005267119                                                           16    7355
XP_006714297                                                           16    7355
NP_061031                                                              15    9605
NP_001265546                                                           15    9605
NP_001273483                                                           15    9605
NP_115523                                                              15    9605
NP_001035862                                                           15    9605
NP_001265322                                                           15    9605
NP_689725                                                              15    9605
XP_006724216                                                           15    9605
XP_006724215                                                           15    9605
XP_006724214                                                           15    9605
XP_006724213                                                           15    9605
XP_006724212                                                           15    9605
XP_005268276                                                           15    9605
XP_005269230                                                           15    9605
XP_005269231                                                           15    9605
XP_005269229                                                           15    9605
NP_004265                                                              15    9605
NP_631917                                                              15    9605
>NP_733751
          Length = 4911

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2488 SHGTMPSQE 2496
>XP_006716142
          Length = 4927

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_005250088
          Length = 4928

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_006716141
          Length = 4959

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_005250085
          Length = 4979

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_006716140
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_005250084
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>XP_005250083
          Length = 4982

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2504 SHGTMPSQE 2512
>XP_005250082
          Length = 4983

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    SHGTMLSQE 9
            SHGTM SQE
Sbjct: 2505 SHGTMPSQE 2513
>NP_055737
          Length = 1429

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LSQE
Sbjct: 1360 HGQVLSQE 1367
>NP_127497
          Length = 1473

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LSQE
Sbjct: 1404 HGQVLSQE 1411
>NP_127500
          Length = 1399

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LSQE
Sbjct: 1330 HGQVLSQE 1337
>NP_127499
          Length = 1443

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LSQE
Sbjct: 1374 HGQVLSQE 1381
>NP_056340
          Length = 1353

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SHGTMLSQE 9
            SHG  LSQ+
Sbjct: 1148 SHGVKLSQK 1156
>NP_001273768
          Length = 1076

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HGTM+  E
Sbjct: 728 HGTMIKME 735
>NP_005757
          Length = 1045

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HGTM+  E
Sbjct: 728 HGTMIKME 735
>NP_000821
          Length = 918

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>NP_783300
          Length = 905

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>XP_005261001
          Length = 903

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>XP_005261000
          Length = 920

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>XP_005260999
          Length = 934

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>XP_006724054
          Length = 949

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2 HGTMLSQ 8
         HGT+L+Q
Sbjct: 3 HGTLLAQ 9
>XP_006719976
          Length = 1045

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HGTM+  E
Sbjct: 728 HGTMIKME 735
>XP_006715518
          Length = 1338

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SHGTMLSQE 9
            SHG  LSQ+
Sbjct: 1133 SHGVKLSQK 1141
>XP_006715517
          Length = 1379

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SHGTMLSQE 9
            SHG  LSQ+
Sbjct: 1133 SHGVKLSQK 1141
>XP_006715516
          Length = 1394

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SHGTMLSQE 9
            SHG  LSQ+
Sbjct: 1148 SHGVKLSQK 1156
>NP_001171601
          Length = 1166

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>NP_001954
          Length = 1207

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>NP_001171602
          Length = 1165

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 461 YGTLLSQQ 468
>NP_061836
          Length = 2320

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTMLSQE 9
            GT+LSQE
Sbjct: 1084 GTVLSQE 1090
>NP_001269789
          Length = 2241

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2230 HGDLLSEE 2237
>NP_055449
          Length = 454

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  GTMLSQE 9
          GT+LSQE
Sbjct: 46 GTVLSQE 52
>NP_001269787
          Length = 2240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2229 HGDLLSEE 2236
>NP_997278
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>NP_001269785
          Length = 2241

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2230 HGDLLSEE 2237
>NP_387505
          Length = 2269

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTMLSQE 9
            GT+LSQE
Sbjct: 1084 GTVLSQE 1090
>NP_055162
          Length = 553

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005261051
          Length = 2242

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3    GTMLSQE 9
            GT+LSQE
Sbjct: 1006 GTVLSQE 1012
>XP_005258975
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005258974
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005258973
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005258972
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005258971
          Length = 544

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_006723194
          Length = 553

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_006723193
          Length = 553

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 351 SHGSNLSQ 358
>XP_005258770
          Length = 558

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 356 SHGSNLSQ 363
>XP_006723192
          Length = 629

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   SHGTMLSQ 8
           SHG+ LSQ
Sbjct: 427 SHGSNLSQ 434
>XP_006719692
          Length = 496

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           HG +LSQ+
Sbjct: 470 HGQLLSQQ 477
>XP_006719691
          Length = 496

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           HG +LSQ+
Sbjct: 470 HGQLLSQQ 477
>XP_005262859
          Length = 688

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005262858
          Length = 914

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005262857
          Length = 1052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005262856
          Length = 1061

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_006714188
          Length = 1132

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 420 YGTLLSQQ 427
>XP_006714187
          Length = 1133

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005262855
          Length = 1134

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005262854
          Length = 1173

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 461 YGTLLSQQ 468
>XP_005262853
          Length = 1215

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   HGTMLSQE 9
           +GT+LSQ+
Sbjct: 503 YGTLLSQQ 510
>XP_005245343
          Length = 1436

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 1425 HGDLLSEE 1432
>XP_005245341
          Length = 2068

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2057 HGDLLSEE 2064
>XP_006711459
          Length = 2240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2229 HGDLLSEE 2236
>XP_005245340
          Length = 2211

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2200 HGDLLSEE 2207
>XP_006711458
          Length = 2240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2229 HGDLLSEE 2236
>XP_006711457
          Length = 2240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2229 HGDLLSEE 2236
>XP_006711456
          Length = 2240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    HGTMLSQE 9
            HG +LS+E
Sbjct: 2229 HGDLLSEE 2236
>NP_065197
          Length = 1610

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           H T+LSQ+
Sbjct: 479 HATILSQD 486
>NP_001137532
          Length = 1606

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           H T+LSQ+
Sbjct: 475 HATILSQD 482
>NP_057683
          Length = 264

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  SHGTMLSQ 8
          SH TM+ Q
Sbjct: 3  SHNTMMKQ 10
>NP_001005283
          Length = 314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  HGTMLSQ 8
          HGT +SQ
Sbjct: 88 HGTTISQ 94
>NP_001014364
          Length = 2391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HGT LSQ
Sbjct: 432 HGTGLSQ 438
>NP_060249
          Length = 527

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HG  LSQE
Sbjct: 151 HGLHLSQE 158
>NP_001107592
          Length = 811

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HG  LSQE
Sbjct: 151 HGLHLSQE 158
>XP_005267120
          Length = 1592

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           H T+LSQ+
Sbjct: 461 HATILSQD 468
>XP_005267119
          Length = 1654

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   HGTMLSQE 9
           H T+LSQ+
Sbjct: 523 HATILSQD 530
>XP_006714297
          Length = 195

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  SHGTMLSQ 8
          SH TM+ Q
Sbjct: 3  SHNTMMKQ 10
>NP_061031
          Length = 640

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 446 HGQLLSQ 452
>NP_001265546
          Length = 1028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHGTMLSQE 9
           S+GT+L  E
Sbjct: 870 SYGTLLDDE 878
>NP_001273483
          Length = 688

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 446 HGQLLSQ 452
>NP_115523
          Length = 712

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>NP_001035862
          Length = 712

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>NP_001265322
          Length = 712

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>NP_689725
          Length = 607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TMLSQE 9
           TMLSQE
Sbjct: 219 TMLSQE 224
>XP_006724216
          Length = 278

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TMLSQE 9
           TMLSQE
Sbjct: 219 TMLSQE 224
>XP_006724215
          Length = 476

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  TMLSQE 9
          TMLSQE
Sbjct: 88 TMLSQE 93
>XP_006724214
          Length = 494

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TMLSQE 9
           TMLSQE
Sbjct: 106 TMLSQE 111
>XP_006724213
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TMLSQE 9
           TMLSQE
Sbjct: 166 TMLSQE 171
>XP_006724212
          Length = 607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TMLSQE 9
           TMLSQE
Sbjct: 219 TMLSQE 224
>XP_005268276
          Length = 2320

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHGTMLSQE 9
           SH  M+S+E
Sbjct: 986 SHDLMMSEE 994
>XP_005269230
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>XP_005269231
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>XP_005269229
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HGTMLSQ 8
           HG +LSQ
Sbjct: 470 HGQLLSQ 476
>NP_004265
          Length = 2319

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SHGTMLSQE 9
           SH  M+S+E
Sbjct: 985 SHDLMMSEE 993
>NP_631917
          Length = 286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   HGTMLSQE 9
           HGT+L  E
Sbjct: 241 HGTLLIME 248
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.301    0.112    0.293 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 476,054
Number of extensions: 721
Number of successful extensions: 93
Number of sequences better than 10000.0: 93
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 93
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package