Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_055835 17 3301 NP_001275932 17 3301 NP_001263278 17 4312 NP_005520 17 4312 NP_653259 17 4312 XP_005262426 17 4312 XP_005262425 17 4312 XP_005245920 17 4312 XP_006710660 17 4312 XP_006710659 17 4312 XP_006710658 17 4312 XP_006710657 17 4312 NP_060396 16 7355 NP_689524 16 7355 NP_060442 16 7355 XP_006720256 16 7355 XP_006720255 16 7355 XP_006720254 16 7355 NP_001010858 15 9605 NP_001139150 15 9605 NP_003117 15 9605 XP_006718839 15 9605 XP_006714651 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4184 SHGIAESA 4191>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4200 SHGIAESA 4207>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4201 SHGIAESA 4208>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4232 SHGIAESA 4239>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4256 SHGIAESA 4263>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4255 SHGIAESA 4262>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4255 SHGIAESA 4262>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4255 SHGIAESA 4262>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SHGIAESA 8 SHGIAESA Sbjct: 4256 SHGIAESA 4263>NP_055835 Length = 1323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHGIAESA 8 SHG+AE A Sbjct: 785 SHGLAEMA 792>NP_001275932 Length = 1256 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SHGIAESA 8 SHG+AE A Sbjct: 718 SHGLAEMA 725>NP_001263278 Length = 66 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SHGIAESAT 9 SH AES+T Sbjct: 57 SHSFAESST 65>NP_005520 Length = 4391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4181 HGIAES 4186>NP_653259 Length = 2073 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 451 HGIAES 456>XP_005262426 Length = 2055 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 420 HGIAES 425>XP_005262425 Length = 2086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 451 HGIAES 456>XP_005245920 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4182 HGIAES 4187>XP_006710660 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4187 HGIAES 4192>XP_006710659 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4346 HGIAES 4351>XP_006710658 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4353 HGIAES 4358>XP_006710657 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAES Sbjct: 4369 HGIAES 4374>NP_060396 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 182 HGLCESA 188>NP_689524 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SHGIAE 6 SHG+AE Sbjct: 65 SHGLAE 70>NP_060442 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 182 HGLCESA 188>XP_006720256 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 182 HGLCESA 188>XP_006720255 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 182 HGLCESA 188>XP_006720254 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 182 HGLCESA 188>NP_001010858 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG AESA Sbjct: 150 HGQAESA 156>NP_001139150 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HGIAESAT 9 HG+ ESA+ Sbjct: 753 HGLDESAS 760>NP_003117 Length = 2419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGIAESA 8 HG+ ESA Sbjct: 729 HGLLESA 735>XP_006718839 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HGIAES 7 HGIAE+ Sbjct: 264 HGIAEA 269>XP_006714651 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HGIAESAT 9 HG+ ESA+ Sbjct: 753 HGLDESAS 760Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.108 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 345,964 Number of extensions: 200 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |