Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001030022 19 665 NP_061873 19 665 XP_005248369 19 665 NP_000468 18 1935 NP_733751 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_071325 17 3301 NP_998778 17 3301 XP_006713920 17 3301 XP_006713919 17 3301 NP_149078 16 5631 NP_001193555 16 5631 NP_000103 15 9605 NP_001166959 15 9605 NP_075556 15 9605 NP_060014 15 9605 NP_689472 15 9605 NP_001166958 15 9605 XP_005262500 15 9605 XP_006723676 15 9605 XP_006723675 15 9605 XP_006723674 15 9605 XP_006723673 15 9605 XP_006713675 15 9605 XP_005247475 15 9605 XP_005247474 15 9605>NP_001030022 Length = 497 Score = 19.2 bits (38), Expect = 665 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SHCIAES 7 SHCIAES Sbjct: 168 SHCIAES 174>NP_061873 Length = 356 Score = 19.2 bits (38), Expect = 665 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SHCIAES 7 SHCIAES Sbjct: 27 SHCIAES 33>XP_005248369 Length = 375 Score = 19.2 bits (38), Expect = 665 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SHCIAES 7 SHCIAES Sbjct: 46 SHCIAES 52>NP_000468 Length = 609 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SHCIAE 6 SHCIAE Sbjct: 311 SHCIAE 316>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4184 SHGIAESAA 4192>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4200 SHGIAESAA 4208>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4201 SHGIAESAA 4209>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4232 SHGIAESAA 4240>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4256 SHGIAESAA 4264>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4255 SHGIAESAA 4263>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4255 SHGIAESAA 4263>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4255 SHGIAESAA 4263>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SHCIAESAA 9 SH IAESAA Sbjct: 4256 SHGIAESAA 4264>NP_071325 Length = 701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HCIAESAA 9 HC A SAA Sbjct: 391 HCFATSAA 398>NP_998778 Length = 701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HCIAESAA 9 HC A SAA Sbjct: 391 HCFATSAA 398>XP_006713920 Length = 701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HCIAESAA 9 HC A SAA Sbjct: 391 HCFATSAA 398>XP_006713919 Length = 701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HCIAESAA 9 HC A SAA Sbjct: 391 HCFATSAA 398>NP_149078 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HCIAES 7 HC AES Sbjct: 58 HCFAES 63>NP_001193555 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HCIAESAA 9 HC ESAA Sbjct: 126 HCPIESAA 133>NP_000103 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 HCIAESAA 9 HC SAA Sbjct: 432 HCFTTSAA 439>NP_001166959 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 385 HCLAE 389>NP_075556 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 1510 HCLAE 1514>NP_060014 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 385 HCLAE 389>NP_689472 Length = 1910 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 535 HCLAE 539>NP_001166958 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 400 HCLAE 404>XP_005262500 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 400 HCLAE 404>XP_006723676 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 1186 HCLAE 1190>XP_006723675 Length = 1623 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 1424 HCLAE 1428>XP_006723674 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 1510 HCLAE 1514>XP_006723673 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 HCIAE 6 HC+AE Sbjct: 1510 HCLAE 1514>XP_006713675 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CIAESA 8 C+AESA Sbjct: 3 CLAESA 8>XP_005247475 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CIAESA 8 C+AESA Sbjct: 3 CLAESA 8>XP_005247474 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CIAESA 8 C+AESA Sbjct: 3 CLAESA 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.110 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 525,086 Number of extensions: 436 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |