Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001253990 18 1482 NP_055563 18 1482 NP_001253988 18 1935 NP_852002 18 1935 NP_001156956 18 1935 NP_079506 18 1935 NP_001150 17 4312 NP_065935 17 4312 NP_001275743 17 4312 NP_115826 17 4312 XP_006723903 17 4312 XP_006723902 17 4312 XP_006716698 17 4312 XP_006716696 17 4312 XP_006716695 17 4312 XP_006716694 17 4312 XP_006716693 17 4312 XP_006716692 17 4312 XP_006716691 17 4312 XP_006716690 17 4312 XP_006716689 17 4312 NP_004706 16 5631 NP_001189433 16 5631 NP_430255 16 5631 NP_006006 16 5631 NP_624361 16 5631 NP_001177848 16 5631 NP_001177847 16 5631 NP_003241 16 5631 XP_006722637 16 5631 XP_005266839 16 5631 NP_036400 16 7355 NP_001278240 16 7355 NP_001026866 16 7355 NP_001025178 16 7355 NP_001119 16 7355 XP_005258767 16 7355 XP_005258766 16 7355 XP_005258765 16 7355 XP_006723187 16 7355 XP_005258763 16 7355 XP_005258764 16 7355 XP_006723186 16 7355 XP_005258762 16 7355 XP_006723185 16 7355 XP_006723184 16 7355 XP_005258761 16 7355 NP_000050 15 9605 NP_003211 15 9605 NP_001027451 15 9605 NP_001035890 15 9605 NP_777577 15 9605 NP_001230208 15 9605 NP_001120686 15 9605 NP_000122 15 9605 NP_062562 15 9605 XP_006721229 15 9605 XP_005256350 15 9605 XP_006720026 15 9605 XP_006715238 15 9605>NP_001253990 Length = 450 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVLHTRIR 9 +GVLH R+R Sbjct: 8 NGVLHCRVR 16>NP_055563 Length = 470 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVLHTRIR 9 +GVLH R+R Sbjct: 28 NGVLHCRVR 36>NP_001253988 Length = 458 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGVLHTRIR 9 +GVLH R+R Sbjct: 28 NGVLHCRLR 36>NP_852002 Length = 520 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 GVLHT IR Sbjct: 409 GVLHTLIR 416>NP_001156956 Length = 546 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 GVLHT IR Sbjct: 435 GVLHTLIR 442>NP_079506 Length = 546 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 GVLHT IR Sbjct: 435 GVLHTLIR 442>NP_001150 Length = 1338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 G+LHTR Sbjct: 1226 GILHTR 1231>NP_065935 Length = 1983 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 G+LH R+R Sbjct: 443 GLLHPRVR 450>NP_001275743 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1436 SGLLHVAIR 1444>NP_115826 Length = 1641 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1445 SGLLHVAIR 1453>XP_006723903 Length = 1989 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 G+LH R+R Sbjct: 443 GLLHPRVR 450>XP_006723902 Length = 1787 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVLHTRIR 9 G+LH R+R Sbjct: 241 GLLHPRVR 248>XP_006716698 Length = 1481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1445 SGLLHVAIR 1453>XP_006716696 Length = 1585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1377 SGLLHVAIR 1385>XP_006716695 Length = 1585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1377 SGLLHVAIR 1385>XP_006716694 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1436 SGLLHVAIR 1444>XP_006716693 Length = 1644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1436 SGLLHVAIR 1444>XP_006716692 Length = 1644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1436 SGLLHVAIR 1444>XP_006716691 Length = 1653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1445 SGLLHVAIR 1453>XP_006716690 Length = 1653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1445 SGLLHVAIR 1453>XP_006716689 Length = 1653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGVLHTRIR 9 SG+LH IR Sbjct: 1445 SGLLHVAIR 1453>NP_004706 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHTRIR 9 +LHTR+R Sbjct: 220 MLHTRLR 226>NP_001189433 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHTRIR 9 +LHTR+R Sbjct: 101 MLHTRLR 107>NP_430255 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHTRIR 9 +LHTR+R Sbjct: 220 MLHTRLR 226>NP_006006 Length = 2285 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGVLHTRI 8 SG+LH RI Sbjct: 1839 SGLLHWRI 1846>NP_624361 Length = 2068 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGVLHTRI 8 SG+LH RI Sbjct: 1622 SGLLHWRI 1629>NP_001177848 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SGVLHTR 7 SG+LH R Sbjct: 450 SGILHAR 456>NP_001177847 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SGVLHTR 7 SG+LH R Sbjct: 411 SGILHAR 417>NP_003241 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SGVLHTR 7 SG+LH R Sbjct: 450 SGILHAR 456>XP_006722637 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHTRIR 9 +LHTR+R Sbjct: 119 MLHTRLR 125>XP_005266839 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHTRIR 9 +LHTR+R Sbjct: 220 MLHTRLR 226>NP_036400 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>NP_001278240 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>NP_001026866 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>NP_001025178 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GVLHTRI 8 GVLHT + Sbjct: 189 GVLHTSV 195>NP_001119 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GVLHTRI 8 GVLHT + Sbjct: 189 GVLHTSV 195>XP_005258767 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258766 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258765 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_006723187 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258763 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258764 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_006723186 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258762 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_006723185 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_006723184 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>XP_005258761 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVLHTR 7 GVLHT+ Sbjct: 198 GVLHTK 203>NP_000050 Length = 3418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SGVLHTRIR 9 SG+LH+ ++ Sbjct: 636 SGLLHSSVK 644>NP_003211 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 105 SGLLHT 110>NP_001027451 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 99 SGLLHT 104>NP_001035890 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 101 SGLLHT 106>NP_777577 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 29 SGLLHT 34>NP_001230208 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 29 SGLLHT 34>NP_001120686 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 29 SGLLHT 34>NP_000122 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GVLHTRIR 9 GVLH R R Sbjct: 53 GVLHRRRR 60>NP_062562 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GVLHTRIR 9 GVLH R R Sbjct: 31 GVLHRRRR 38>XP_006721229 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 29 SGLLHT 34>XP_005256350 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 29 SGLLHT 34>XP_006720026 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GVLHTRIR 9 GVLH R R Sbjct: 31 GVLHRRRR 38>XP_006715238 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SGVLHT 6 SG+LHT Sbjct: 150 SGLLHT 155Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.142 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 677,185 Number of extensions: 1009 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |