Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_919047 18 1482 XP_005250598 18 1482 NP_001128144 17 3301 NP_071346 17 3301 XP_006718002 17 3301 XP_005270081 17 3301 NP_004514 16 5631 NP_001495 16 7355 NP_001136269 16 7355 NP_001157790 16 7355 NP_001034456 16 7355 NP_001034455 16 7355 NP_001687 16 7355 NP_001157791 16 7355 NP_001157789 16 7355 NP_878267 16 7355 NP_001448 16 7355 NP_542384 16 7355 XP_005262313 16 7355 XP_005272199 16 7355 XP_006713130 16 7355 XP_005265039 16 7355 XP_005265038 16 7355 XP_005265035 16 7355 XP_005265034 16 7355 XP_005246728 16 7355 XP_005264691 16 7355 XP_005264690 16 7355 NP_000382 15 9605 NP_001092740 15 9605 NP_037498 15 9605 NP_002239 15 9605 NP_001127666 15 9605 NP_008949 15 9605 NP_001090 15 9605 XP_005259964 15 9605 XP_005259963 15 9605 XP_005259962 15 9605 XP_006717396 15 9605 XP_006717395 15 9605 XP_005252375 15 9605 XP_006717394 15 9605 XP_006717393 15 9605 XP_006717391 15 9605 XP_006717390 15 9605 XP_005252046 15 9605 XP_006717007 15 9605 XP_006717005 15 9605 XP_006717004 15 9605 XP_006717003 15 9605 XP_005251736 15 9605>NP_919047 Length = 520 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGLESRLDV 9 SGLESR DV Sbjct: 463 SGLESRPDV 471>XP_005250598 Length = 457 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGLESRLDV 9 SGLESR DV Sbjct: 400 SGLESRPDV 408>NP_001128144 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGLESRLD 8 SGLE R+D Sbjct: 152 SGLEKRID 159>NP_071346 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGLESRLD 8 SGLE R+D Sbjct: 152 SGLEKRID 159>XP_006718002 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGLESRLD 8 SGLE R+D Sbjct: 152 SGLEKRID 159>XP_005270081 Length = 240 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGLESRLD 8 SGLE R+D Sbjct: 159 SGLEKRID 166>NP_004514 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGLESRLD 8 SGL S+LD Sbjct: 511 SGLHSKLD 518>NP_001495 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLESRLDV 9 G ESR+DV Sbjct: 291 GRESRVDV 298>NP_001136269 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLESRLDV 9 G ESR+DV Sbjct: 338 GRESRVDV 345>NP_001157790 Length = 2591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>NP_001034456 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 166 LESRLDL 172>NP_001034455 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 174 LESRLDL 180>NP_001687 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 196 LESRLDL 202>NP_001157791 Length = 2578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>NP_001157789 Length = 2633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>NP_878267 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGLESRLDV 9 SGLE LD+ Sbjct: 349 SGLEIMLDI 357>NP_001448 Length = 2602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>NP_542384 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 196 LESRLDL 202>XP_005262313 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLESRLDV 9 G ESR+DV Sbjct: 301 GRESRVDV 308>XP_005272199 Length = 1032 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLESRLDV 9 G+ES++DV Sbjct: 866 GIESQVDV 873>XP_006713130 Length = 2109 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>XP_005265039 Length = 2177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>XP_005265038 Length = 2181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>XP_005265035 Length = 2609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>XP_005265034 Length = 2622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SGLESRLDV 9 +GLE+R++V Sbjct: 950 NGLENRVEV 958>XP_005246728 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGLESRLDV 9 SGLE LD+ Sbjct: 222 SGLEIMLDI 230>XP_005264691 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 196 LESRLDL 202>XP_005264690 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LESRLDV 9 LESRLD+ Sbjct: 196 LESRLDL 202>NP_000382 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGLESRLDV 9 +G+E+ LDV Sbjct: 269 AGIEASLDV 277>NP_001092740 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 GLESRLDV 9 GL+SR+++ Sbjct: 485 GLDSRMEI 492>NP_037498 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 118 LESRLD 123>NP_002239 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 485 LESRLD 490>NP_001127666 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGLESRLDV 9 SGL+ LDV Sbjct: 294 SGLQMALDV 302>NP_008949 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 574 LESRLD 579>NP_001090 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGLESRLDV 9 SGL+ LDV Sbjct: 294 SGLQMALDV 302>XP_005259964 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 565 LESRLD 570>XP_005259963 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 568 LESRLD 573>XP_005259962 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 571 LESRLD 576>XP_006717396 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 354 SGLESR 359>XP_006717395 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 382 SGLESR 387>XP_005252375 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 412 SGLESR 417>XP_006717394 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 395 SGLESR 400>XP_006717393 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 412 SGLESR 417>XP_006717391 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 412 SGLESR 417>XP_006717390 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGLESR 6 SGLESR Sbjct: 412 SGLESR 417>XP_005252046 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 GLESRLDV 9 GL+SR+++ Sbjct: 499 GLDSRMEI 506>XP_006717007 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 574 LESRLD 579>XP_006717005 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 22 LESRLD 27>XP_006717004 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 574 LESRLD 579>XP_006717003 Length = 2278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 574 LESRLD 579>XP_005251736 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LESRLD 8 LESRLD Sbjct: 574 LESRLD 579Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.132 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,612 Number of extensions: 726 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |