Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 18 1135 NP_001243397 18 1135 XP_005269721 18 1135 NP_060354 18 1935 NP_653296 17 4312 NP_001234930 17 4312 NP_001275510 17 4312 NP_001275508 17 4312 NP_001234929 17 4312 NP_003002 17 4312 NP_001116293 17 4312 NP_001275509 17 4312 XP_005273126 17 4312 XP_006711236 17 4312 XP_005273123 17 4312 XP_005273122 17 4312 NP_001017969 16 5631 NP_612369 16 5631 NP_001139812 16 5631 XP_006716793 16 5631 XP_005251442 16 5631 NP_065734 16 7355 NP_001075445 16 7355 NP_004711 16 7355 XP_005268460 16 7355 XP_006714837 16 7355 XP_006714836 16 7355 XP_005268457 16 7355 XP_006714833 16 7355 XP_005268456 16 7355 XP_006714831 16 7355 XP_005268455 16 7355 XP_005270547 16 7355 XP_005270546 16 7355 XP_005270543 16 7355 XP_005270542 16 7355 NP_000535 15 9605 NP_150094 15 9605 NP_001264044 15 9605 NP_059106 15 9605 NP_001265097 15 9605 NP_057492 15 9605 NP_001265096 15 9605 NP_057166 15 9605 NP_001121902 15 9605 NP_001121901 15 9605 NP_612504 15 9605 NP_005086 15 9605 NP_076427 15 9605 NP_065776 15 9605 NP_064544 15 9605 NP_001077393 15 9605 NP_056025 15 9605 XP_006722382 15 9605 XP_006722381 15 9605 XP_005258156 15 9605 XP_005258155 15 9605 XP_005250278 15 9605 XP_006715967 15 9605 XP_006715966 15 9605 XP_005250277 15 9605 XP_006715965 15 9605 XP_005250276 15 9605 XP_006715964 15 9605 XP_006715963 15 9605 XP_006714340 15 9605 XP_006714339 15 9605 XP_006714338 15 9605 XP_005273316 15 9605 XP_006711593 15 9605 XP_006711098 15 9605 XP_006711097 15 9605 XP_005271387 15 9605 XP_005271385 15 9605>NP_036462 Length = 2073 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SGKD SSRL Sbjct: 391 SGKDSSSRL 399>NP_001243397 Length = 1890 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SGKD SSRL Sbjct: 391 SGKDSSSRL 399>XP_005269721 Length = 2073 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SGKD SSRL Sbjct: 391 SGKDSSSRL 399>NP_060354 Length = 328 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GKDLSSR 8 GKDLSSR Sbjct: 132 GKDLSSR 138>NP_653296 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 172 GRDLESRL 179>NP_001234930 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGKDLSSR 8 SGKDL+ R Sbjct: 151 SGKDLTKR 158>NP_001275510 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 172 GRDLESRL 179>NP_001275508 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 140 GRDLESRL 147>NP_001234929 Length = 268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGKDLSSR 8 SGKDL+ R Sbjct: 153 SGKDLTKR 160>NP_003002 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGKDLSSR 8 SGKDL+ R Sbjct: 162 SGKDLTKR 169>NP_001116293 Length = 290 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGKDLSSR 8 SGKDL+ R Sbjct: 175 SGKDLTKR 182>NP_001275509 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 140 GRDLESRL 147>XP_005273126 Length = 356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 117 GRDLESRL 124>XP_006711236 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 189 GRDLESRL 196>XP_005273123 Length = 432 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 193 GRDLESRL 200>XP_005273122 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 225 GRDLESRL 232>NP_001017969 Length = 2103 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGKDLSSRL 9 SG D SSR+ Sbjct: 1683 SGNDTSSRI 1691>NP_612369 Length = 1372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKDLSSR 8 G+DLSSR Sbjct: 876 GQDLSSR 882>NP_001139812 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGKDLSSR 8 +GKD SSR Sbjct: 55 AGKDASSR 62>XP_006716793 Length = 1317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGKDLSSRL 9 SG D SSR+ Sbjct: 897 SGNDTSSRI 905>XP_005251442 Length = 2073 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGKDLSSRL 9 SG D SSR+ Sbjct: 1653 SGNDTSSRI 1661>NP_065734 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 266 SGKDLS 271>NP_001075445 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 185 SGKDLS 190>NP_004711 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SGKDLSS 7 SGK+LSS Sbjct: 20 SGKELSS 26>XP_005268460 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714837 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714836 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268457 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714833 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268456 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_006714831 Length = 812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_005268455 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GKDLSS 7 GKDLSS Sbjct: 93 GKDLSS 98>XP_005270547 Length = 178 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 97 SGKDLS 102>XP_005270546 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 112 SGKDLS 117>XP_005270543 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 134 SGKDLS 139>XP_005270542 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SGKDLS 6 SGKDLS Sbjct: 266 SGKDLS 271>NP_000535 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G+DL SRL Sbjct: 689 GQDLYSRL 696>NP_150094 Length = 3564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GKDLSSR 8 GKD SSR Sbjct: 1162 GKDSSSR 1168>NP_001264044 Length = 4516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 1601 KDLQSRL 1607>NP_059106 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GKDLSSR 8 G DLSSR Sbjct: 162 GDDLSSR 168>NP_001265097 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KD SSRL Sbjct: 53 KDFSSRL 59>NP_057492 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KD SSRL Sbjct: 53 KDFSSRL 59>NP_001265096 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KD SSRL Sbjct: 53 KDFSSRL 59>NP_057166 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KD SSRL Sbjct: 54 KDFSSRL 60>NP_001121902 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 308 NGKEVSSR 315>NP_001121901 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 308 NGKEVSSR 315>NP_612504 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 305 GGDLASRL 312>NP_005086 Length = 1548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 188 KDLDSRL 194>NP_076427 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SG+D +SRL Sbjct: 282 SGEDPNSRL 290>NP_065776 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>NP_064544 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 308 NGKEVSSR 315>NP_001077393 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SG+D +SRL Sbjct: 36 SGEDPNSRL 44>NP_056025 Length = 1586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GKDLSSRL 9 G DL SRL Sbjct: 573 GPDLQSRL 580>XP_006722382 Length = 1644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GKDLSSRL 9 G DL SRL Sbjct: 594 GPDLQSRL 601>XP_006722381 Length = 1672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GKDLSSRL 9 G DL SRL Sbjct: 594 GPDLQSRL 601>XP_005258156 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GKDLSSRL 9 G DL SRL Sbjct: 933 GPDLQSRL 940>XP_005258155 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GKDLSSRL 9 G DL SRL Sbjct: 933 GPDLQSRL 940>XP_005250278 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 213 GGDLASRL 220>XP_006715967 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 128 GGDLASRL 135>XP_006715966 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_005250277 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_006715965 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_005250276 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_006715964 Length = 964 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_006715963 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKDLSSRL 9 G DL+SRL Sbjct: 429 GGDLASRL 436>XP_006714340 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 308 NGKEVSSR 315>XP_006714339 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 75 NGKEVSSR 82>XP_006714338 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SGKDLSSR 8 +GK++SSR Sbjct: 278 NGKEVSSR 285>XP_005273316 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SG+D +SRL Sbjct: 36 SGEDPNSRL 44>XP_006711593 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGKDLSSRL 9 SG+D +SRL Sbjct: 282 SGEDPNSRL 290>XP_006711098 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 156 KDLDSRL 162>XP_006711097 Length = 1542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 182 KDLDSRL 188>XP_005271387 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 185 KDLDSRL 191>XP_005271385 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KDLSSRL 9 KDL SRL Sbjct: 191 KDLDSRL 197Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.123 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 574,648 Number of extensions: 1191 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |