Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_065850 17 3301 XP_006717993 17 3301 XP_006717992 17 3301 XP_006717991 17 3301 NP_998814 17 4312 XP_005269584 17 4312 XP_005269583 17 4312 XP_006717688 17 4312 XP_005269582 17 4312 NP_001164269 17 4312 NP_055412 16 5631 XP_006715622 16 5631 XP_005267190 16 5631 XP_005267189 16 5631 XP_005267187 16 5631 XP_005267185 16 5631 XP_005267184 16 5631 NP_009055 16 5631 NP_775835 16 7355 XP_005250285 16 7355 XP_006715971 16 7355 XP_006715970 16 7355 NP_821075 15 9605 NP_443083 15 9605 NP_821074 15 9605 NP_001230405 15 9605 NP_001263256 15 9605 NP_001263255 15 9605 NP_700357 15 9605 NP_653186 15 9605 NP_073744 15 9605 NP_001030611 15 9605 NP_061146 15 9605 NP_001136438 15 9605 NP_277039 15 9605 NP_001008781 15 9605 NP_065748 15 9605 NP_954872 15 9605 XP_006722610 15 9605 XP_006719952 15 9605 XP_006719951 15 9605 XP_005266643 15 9605 XP_006718827 15 9605 XP_006718494 15 9605 XP_005273799 15 9605 XP_006718493 15 9605 XP_005252192 15 9605 XP_005270465 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 914 SGIGAVVLP 922>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 914 SGIGAVVLP 922>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGI AVVLP Sbjct: 915 SGIGAVVLP 923>NP_065850 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717993 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717992 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717991 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VVLP Sbjct: 265 GLRCVVLP 272>NP_998814 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIRAVVLP 9 GI++V+LP Sbjct: 130 GIKSVILP 137>XP_005269584 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIRAVVLP 9 GI++V+LP Sbjct: 14 GIKSVILP 21>XP_005269583 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIRAVVLP 9 GI++V+LP Sbjct: 14 GIKSVILP 21>XP_006717688 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIRAVVLP 9 GI++V+LP Sbjct: 130 GIKSVILP 137>XP_005269582 Length = 328 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GIRAVVLP 9 GI++V+LP Sbjct: 121 GIKSVILP 128>NP_001164269 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+RA+V P Sbjct: 168 GVRAIVCP 175>NP_055412 Length = 756 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGIRAVVLP 9 SGI +VLP Sbjct: 148 SGISRIVLP 156>XP_006715622 Length = 2499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 927 SGIRSSLLP 935>XP_005267190 Length = 3424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1852 SGIRSSLLP 1860>XP_005267189 Length = 3425 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1866 SGIRSSLLP 1874>XP_005267187 Length = 3433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1861 SGIRSSLLP 1869>XP_005267185 Length = 3437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1865 SGIRSSLLP 1873>XP_005267184 Length = 3438 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1866 SGIRSSLLP 1874>NP_009055 Length = 3433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SGIR+ +LP Sbjct: 1861 SGIRSSLLP 1869>NP_775835 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R VVL Sbjct: 734 SGVRQVVL 741>XP_005250285 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R VVL Sbjct: 735 SGVRQVVL 742>XP_006715971 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R VVL Sbjct: 735 SGVRQVVL 742>XP_006715970 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R VVL Sbjct: 735 SGVRQVVL 742>NP_821075 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 1036 GVRAVVM 1042>NP_443083 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 926 GVRAVVM 932>NP_821074 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 1044 GVRAVVM 1050>NP_001230405 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 1009 GVRAVVM 1015>NP_001263256 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 400 SGLAALLLP 408>NP_001263255 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 474 SGLAALLLP 482>NP_700357 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 287 SGLAALLLP 295>NP_653186 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 508 SGLAALLLP 516>NP_073744 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGIRAVVLP 9 S IRA +LP Sbjct: 321 SKIRAFILP 329>NP_001030611 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGIRAVVLP 9 S IRA +LP Sbjct: 308 SKIRAFILP 316>NP_061146 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SGIRAVVLP 9 SG+ VLP Sbjct: 254 SGVEVTVLP 262>NP_001136438 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R V+L Sbjct: 394 SGVRPVIL 401>NP_277039 Length = 222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SGI A+VL Sbjct: 74 SGIAAIVL 81>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VV+P Sbjct: 4134 GLRPVVVP 4141>NP_065748 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGIRAVVLP 9 +GI VVLP Sbjct: 397 AGILVVVLP 405>NP_954872 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SGIRAVVLP 9 SG+ VLP Sbjct: 254 SGVEVTVLP 262>XP_006722610 Length = 1967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SG+R V+L Sbjct: 437 SGVRPVIL 444>XP_006719952 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 926 GVRAVVM 932>XP_006719951 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 926 GVRAVVM 932>XP_005266643 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIRAVVL 8 G+RAVV+ Sbjct: 1029 GVRAVVM 1035>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIRAVVLP 9 G+R VV+P Sbjct: 3024 GLRPVVVP 3031>XP_006718494 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 498 SGLAALLLP 506>XP_005273799 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 533 SGLAALLLP 541>XP_006718493 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SGIRAVVLP 9 SG+ A++LP Sbjct: 533 SGLAALLLP 541>XP_005252192 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SGIRAVVLP 9 S IRA +LP Sbjct: 310 SKIRAFILP 318>XP_005270465 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SGIRAVVL 8 SGI A+VL Sbjct: 74 SGIAAIVL 81Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.144 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,296 Number of extensions: 662 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |