Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001269288 16 7355 NP_001269289 16 7355 NP_001013768 16 7355 NP_057304 16 7355 NP_056936 16 7355 NP_001001415 16 7355 NP_001243102 16 7355 NP_001243100 16 7355 NP_001152765 16 7355 NP_003420 16 7355 XP_006726294 16 7355 XP_006726293 16 7355 XP_006722940 16 7355 XP_006722939 16 7355 XP_006722662 16 7355 XP_006722661 16 7355 XP_005259757 16 7355 XP_005259756 16 7355 XP_005259755 16 7355 XP_006722660 16 7355 XP_005259754 16 7355 XP_006716085 16 7355 XP_005250458 16 7355 NP_006556 15 9605 NP_001255979 15 9605 NP_001338 15 9605 NP_001255983 15 9605 NP_001255971 15 9605 NP_001255970 15 9605 NP_001255978 15 9605 NP_001255972 15 9605 NP_001255981 15 9605 NP_542185 15 9605 NP_001255976 15 9605 NP_001255975 15 9605 NP_001255974 15 9605 NP_001255973 15 9605 NP_001255969 15 9605 NP_001255984 15 9605 NP_001255977 15 9605 NP_001255980 15 9605 NP_001094092 15 9605 NP_001275700 15 9605 NP_001258567 15 9605 NP_006515 15 9605 NP_001258568 15 9605 XP_006722029 15 9605 XP_005255832 15 9605 XP_006713926 15 9605 XP_003961004 15 9605 XP_005276139 15 9605 NP_001230891 15 9605>NP_001269288 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>NP_001269289 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 62 SFQKVTLRR 70>NP_001013768 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 25 SFQKVTLRR 33>NP_057304 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 25 SFQKVTLRR 33>NP_056936 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 30 SFQKVTLRR 38>NP_001001415 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>NP_001243102 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 31 SFQKVTLKR 39>NP_001243100 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 125 SFQKVTLKR 133>NP_001152765 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>NP_003420 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 95 SFQKVTLKR 103>XP_006726294 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 125 SFQKVTLKR 133>XP_006726293 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 125 SFQKVTLKR 133>XP_006722940 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 125 SFQKVTLKR 133>XP_006722939 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 125 SFQKVTLKR 133>XP_006722662 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_006722661 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_005259757 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_005259756 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_005259755 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_006722660 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_005259754 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 94 SFQKVTLRR 102>XP_006716085 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 25 SFQKVTLRR 33>XP_005250458 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFRAVTLQR 9 SF+ VTL+R Sbjct: 25 SFQKVTLRR 33>NP_006556 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 302 AFRTVTLLR 310>NP_001255979 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 88 TFRTVTLLR 96>NP_001338 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SFR VTL + Sbjct: 62 SFRKVTLTK 70>NP_001255983 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 31 TFRTVTLLR 39>NP_001255971 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255970 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255978 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 88 TFRTVTLLR 96>NP_001255972 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255981 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_542185 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255976 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255975 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255974 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255973 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255969 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255984 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 31 TFRTVTLLR 39>NP_001255977 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001255980 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 293 TFRTVTLLR 301>NP_001094092 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SFR + LQR Sbjct: 572 SFRRLKLQR 580>NP_001275700 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SFR + LQR Sbjct: 536 SFRRLKLQR 544>NP_001258567 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SF+ VTL R Sbjct: 56 SFQKVTLSR 64>NP_006515 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SF+ VTL R Sbjct: 62 SFQKVTLSR 70>NP_001258568 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SF+ VTL R Sbjct: 88 SFQKVTLSR 96>XP_006722029 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SFR + LQR Sbjct: 536 SFRRLKLQR 544>XP_005255832 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 +FR VTL R Sbjct: 302 AFRTVTLLR 310>XP_006713926 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFRAVTLQR 9 SFR VTL + Sbjct: 62 SFRKVTLTK 70>XP_003961004 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FRAVTL 7 FRAVTL Sbjct: 111 FRAVTL 116>XP_005276139 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FRAVTL 7 FRAVTL Sbjct: 111 FRAVTL 116>NP_001230891 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FRAVTL 7 FRAVTL Sbjct: 79 FRAVTL 84Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.134 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 303,877 Number of extensions: 363 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |