Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 21 229 NP_858045 21 229 NP_006525 21 229 NP_001167559 21 229 NP_003296 18 1935 NP_001124170 18 1935 NP_003696 17 3301 XP_005246980 17 3301 NP_001153682 17 4312 NP_065188 17 4312 NP_001027566 17 4312 NP_001027567 17 4312 NP_055066 17 4312 NP_940971 17 4312 NP_542376 17 4312 NP_004361 17 4312 XP_006715896 17 4312 XP_006715895 17 4312 XP_006715894 17 4312 XP_006715893 17 4312 XP_005267118 17 4312 XP_006715581 17 4312 XP_006715580 17 4312 XP_006715579 17 4312 XP_006715397 17 4312 NP_001074011 16 5631 NP_001175 16 7355 NP_004280 16 7355 NP_001273028 16 7355 NP_068817 16 7355 NP_001239160 16 7355 NP_001013683 16 7355 NP_005272 16 7355 NP_005275 16 7355 XP_005271911 16 7355 NP_002309 15 9605 NP_849189 15 9605 NP_002541 15 9605 NP_002542 15 9605 NP_005672 15 9605 NP_001188465 15 9605 NP_647603 15 9605 NP_057422 15 9605 NP_055797 15 9605 XP_005267486 15 9605 XP_006720145 15 9605 XP_005267485 15 9605 XP_005267483 15 9605 XP_005267482 15 9605 XP_005267481 15 9605 XP_005267480 15 9605 XP_005267479 15 9605 XP_005267478 15 9605 XP_005267477 15 9605 XP_005269574 15 9605 XP_006717681 15 9605 XP_005273400 15 9605 XP_006711676 15 9605 NP_001128251 15 9605>NP_001167558 Length = 1423 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SFNSMINQM 9 SFNSM+NQM Sbjct: 1134 SFNSMMNQM 1142>NP_858045 Length = 1424 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SFNSMINQM 9 SFNSM+NQM Sbjct: 1134 SFNSMMNQM 1142>NP_006525 Length = 1420 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SFNSMINQM 9 SFNSM+NQM Sbjct: 1134 SFNSMMNQM 1142>NP_001167559 Length = 1415 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SFNSMINQM 9 SFNSM+NQM Sbjct: 1129 SFNSMMNQM 1137>NP_003296 Length = 848 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SFNSMINQ 8 SFNS++NQ Sbjct: 764 SFNSILNQ 771>NP_001124170 Length = 921 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SFNSMINQ 8 SFNS++NQ Sbjct: 837 SFNSILNQ 844>NP_003696 Length = 678 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SFNSMINQM 9 +FNS++N M Sbjct: 221 AFNSLLNNM 229>XP_005246980 Length = 661 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SFNSMINQM 9 +FNS++N M Sbjct: 204 AFNSLLNNM 212>NP_001153682 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 223 FNSLLNNM 230>NP_065188 Length = 1221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 119 SFNSSANEM 127>NP_001027566 Length = 1193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 119 SFNSSANEM 127>NP_001027567 Length = 1222 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 119 SFNSSANEM 127>NP_055066 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 223 FNSLLNNM 230>NP_940971 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 119 SFNSSANEM 127>NP_542376 Length = 1899 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FN M+NQ+ Sbjct: 1759 FNQMLNQI 1766>NP_004361 Length = 3063 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FN M+NQ+ Sbjct: 2923 FNQMLNQI 2930>XP_006715896 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_006715895 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 115 FNSLLNNM 122>XP_006715894 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_006715893 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FNS++N M Sbjct: 234 FNSLLNNM 241>XP_005267118 Length = 1222 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 120 SFNSSANEM 128>XP_006715581 Length = 1223 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 120 SFNSSANEM 128>XP_006715580 Length = 1249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 118 SFNSSANEM 126>XP_006715579 Length = 1251 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFNS N+M Sbjct: 120 SFNSSANEM 128>XP_006715397 Length = 2972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FN M+NQ+ Sbjct: 2832 FNQMLNQI 2839>NP_001074011 Length = 1133 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SFNSMINQM 9 S NS+I+QM Sbjct: 735 SLNSIIHQM 743>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FNSMINQ 8 FNS+IN+ Sbjct: 2341 FNSLINK 2347>NP_004280 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SFNSMINQ 8 SFNSM+++ Sbjct: 561 SFNSMLSR 568>NP_001273028 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 ++NSMIN Sbjct: 334 TYNSMIN 340>NP_068817 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FNSMINQ 8 FNS +NQ Sbjct: 239 FNSAVNQ 245>NP_001239160 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FNSMINQ 8 FNS +NQ Sbjct: 239 FNSAVNQ 245>NP_001013683 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SFNSMINQ 8 SF+S INQ Sbjct: 210 SFHSSINQ 217>NP_005272 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 ++NSMIN Sbjct: 287 TYNSMIN 293>NP_005275 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 ++NSMIN Sbjct: 319 TYNSMIN 325>XP_005271911 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FNSMINQ 8 FNS +NQ Sbjct: 239 FNSAVNQ 245>NP_002309 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSMINQM 9 NS+INQ+ Sbjct: 170 NSLINQI 176>NP_849189 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 SFN+++N Sbjct: 125 SFNALVN 131>NP_002541 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FN++IN M Sbjct: 280 FNTVINPM 287>NP_002542 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNSMINQM 9 FN++IN M Sbjct: 286 FNTVINPM 293>NP_005672 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFN+ N+M Sbjct: 117 SFNTFANRM 125>NP_001188465 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFN+ N+M Sbjct: 117 SFNTFANRM 125>NP_647603 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFN+ N+M Sbjct: 3 SFNTFANRM 11>NP_057422 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FNSMINQM 9 F+S++N+M Sbjct: 806 FSSLLNEM 813>NP_055797 Length = 2341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2170 SMVNQM 2175>XP_005267486 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 1250 SMVNQM 1255>XP_006720145 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 1252 SMVNQM 1257>XP_005267485 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 1288 SMVNQM 1293>XP_005267483 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2059 SMVNQM 2064>XP_005267482 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2072 SMVNQM 2077>XP_005267481 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2122 SMVNQM 2127>XP_005267480 Length = 2336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2165 SMVNQM 2170>XP_005267479 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2173 SMVNQM 2178>XP_005267478 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2177 SMVNQM 2182>XP_005267477 Length = 2349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SMINQM 9 SM+NQM Sbjct: 2178 SMVNQM 2183>XP_005269574 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 SFN+++N Sbjct: 137 SFNALVN 143>XP_006717681 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SFNSMIN 7 SFN+++N Sbjct: 143 SFNALVN 149>XP_005273400 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFN+ N+M Sbjct: 117 SFNTFANRM 125>XP_006711676 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SFNSMINQM 9 SFN+ N+M Sbjct: 3 SFNTFANRM 11>NP_001128251 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FNSMINQM 9 F+S++N+M Sbjct: 846 FSSLLNEM 853Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.120 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 332,903 Number of extensions: 415 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |