Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001600 18 1135 XP_006725008 18 1135 XP_005244808 18 1135 NP_001010926 18 1135 NP_001275701 18 1935 NP_004561 18 1935 NP_001275703 18 1935 XP_005253450 18 1935 XP_006719151 18 1935 NP_001106819 16 7355 NP_001106820 16 7355 NP_001388 16 7355 NP_001106818 16 7355 NP_001243275 16 7355 NP_056257 16 7355 NP_002855 16 7355 NP_000005 16 7355 NP_001026872 16 7355 NP_001243277 16 7355 NP_001243276 16 7355 NP_001243670 16 7355 NP_001243671 16 7355 XP_006719119 16 7355 XP_006713148 16 7355 XP_006713147 16 7355 XP_006710461 16 7355 NP_008958 15 9605 NP_005498 15 9605 NP_057250 15 9605 NP_003433 15 9605 NP_055051 15 9605 NP_057595 15 9605 NP_001269586 15 9605 NP_001269585 15 9605 XP_005254792 15 9605 XP_005254791 15 9605 XP_005253440 15 9605 XP_005253183 15 9605 XP_005253179 15 9605 XP_005253178 15 9605 XP_005247133 15 9605 XP_005273371 15 9605 XP_005273370 15 9605>NP_001600 Length = 432 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 SFCLSEA 7 SFCLSEA Sbjct: 173 SFCLSEA 179>XP_006725008 Length = 198 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 S+CL EAVQ Sbjct: 125 SWCLQEAVQ 133>XP_005244808 Length = 198 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 S+CL EAVQ Sbjct: 125 SWCLQEAVQ 133>NP_001010926 Length = 166 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 S+CL EAVQ Sbjct: 93 SWCLQEAVQ 101>NP_001275701 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 SF LSEAVQ Sbjct: 1343 SFFLSEAVQ 1351>NP_004561 Length = 1445 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 SF LSEAVQ Sbjct: 1302 SFFLSEAVQ 1310>NP_001275703 Length = 1264 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 SF LSEAVQ Sbjct: 1121 SFFLSEAVQ 1129>XP_005253450 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 SF LSEAVQ Sbjct: 1343 SFFLSEAVQ 1351>XP_006719151 Length = 1486 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SFCLSEAVQ 9 SF LSEAVQ Sbjct: 1343 SFFLSEAVQ 1351>NP_001106819 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SFCLSEA 7 S CLSEA Sbjct: 81 SVCLSEA 87>NP_001106820 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SFCLSEA 7 S CLSEA Sbjct: 94 SVCLSEA 100>NP_001388 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SFCLSEA 7 S CLSEA Sbjct: 97 SVCLSEA 103>NP_001106818 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SFCLSEA 7 S CLSEA Sbjct: 85 SVCLSEA 91>NP_001243275 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FCLSEAVQ 9 F +SEAVQ Sbjct: 449 FLMSEAVQ 456>NP_056257 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 CL EAVQ Sbjct: 377 CLIEAVQ 383>NP_002855 Length = 1482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SFCLSE 6 +FCLSE Sbjct: 775 AFCLSE 780>NP_000005 Length = 1474 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SFCLSE 6 +FCLSE Sbjct: 769 AFCLSE 774>NP_001026872 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FCLSEAVQ 9 F +SEAVQ Sbjct: 449 FLMSEAVQ 456>NP_001243277 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FCLSEAVQ 9 F +SEAVQ Sbjct: 391 FLMSEAVQ 398>NP_001243276 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FCLSEAVQ 9 F +SEAVQ Sbjct: 503 FLMSEAVQ 510>NP_001243670 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 CL EAVQ Sbjct: 377 CLIEAVQ 383>NP_001243671 Length = 804 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 CL EAVQ Sbjct: 437 CLIEAVQ 443>XP_006719119 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SFCLSE 6 +FCLSE Sbjct: 769 AFCLSE 774>XP_006713148 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 CL EAVQ Sbjct: 437 CLIEAVQ 443>XP_006713147 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 CL EAVQ Sbjct: 437 CLIEAVQ 443>XP_006710461 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SFCLSEA 7 S CLSEA Sbjct: 80 SVCLSEA 86>NP_008958 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 ++CL EA+ Sbjct: 1483 NYCLPEAI 1490>NP_005498 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 38 FCLSE 42>NP_057250 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 202 FCLSE 206>NP_003433 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 27 TLCLTEAV 34>NP_055051 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 C SEA+Q Sbjct: 544 CKSEAIQ 550>NP_057595 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 164 FCLSE 168>NP_001269586 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 27 TLCLTEAV 34>NP_001269585 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 27 TLCLTEAV 34>XP_005254792 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 193 FCLSE 197>XP_005254791 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 195 FCLSE 199>XP_005253440 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FCLSE 6 FCLSE Sbjct: 131 FCLSE 135>XP_005253183 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 42 TLCLTEAV 49>XP_005253179 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 42 TLCLTEAV 49>XP_005253178 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 + CL+EAV Sbjct: 42 TLCLTEAV 49>XP_005247133 Length = 1517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SFCLSEAV 8 ++CL EA+ Sbjct: 1478 NYCLPEAI 1485>XP_005273371 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 C SEA+Q Sbjct: 483 CKSEAIQ 489>XP_005273370 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CLSEAVQ 9 C SEA+Q Sbjct: 543 CKSEAIQ 549Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.125 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,854 Number of extensions: 330 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |