Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 NP_653080 20 509 XP_005267292 20 509 XP_005267291 20 509 XP_005267290 20 509 NP_055444 17 3301 XP_006725174 17 3301 XP_006725173 17 3301 XP_006725172 17 3301 XP_006725171 17 3301 XP_006725170 17 3301 XP_006725169 17 3301 XP_006725168 17 3301 XP_006725167 17 3301 XP_005266099 17 3301 XP_006716304 17 3301 XP_006716303 17 3301 XP_006716302 17 3301 XP_005266098 17 3301 XP_005266097 17 3301 XP_005266096 17 3301 XP_006716301 17 3301 NP_001231118 17 4312 NP_001231121 17 4312 NP_055564 17 4312 NP_001231119 17 4312 NP_001231120 17 4312 NP_001231122 17 4312 NP_002652 17 4312 NP_004690 17 4312 NP_036267 17 4312 XP_006720406 17 4312 XP_006720405 17 4312 XP_006720404 17 4312 XP_006720403 17 4312 XP_006720402 17 4312 XP_006720400 17 4312 XP_006720399 17 4312 NP_071349 16 7355 NP_055299 16 7355 XP_005257625 16 7355 XP_005257624 16 7355 XP_005245161 16 7355 NP_037485 16 7355 NP_078934 15 9605 NP_689805 15 9605 NP_001135444 15 9605 XP_006720401 15 9605 XP_006720130 15 9605 XP_006720128 15 9605 XP_006720127 15 9605 XP_006720126 15 9605 XP_005267433 15 9605 XP_005267434 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 SEYDAVE E Sbjct: 850 SEYDAVERE 858>NP_653080 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 SEYDAVE E Sbjct: 752 SEYDAVERE 760>XP_005267292 Length = 1677 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 SEYDAVE E Sbjct: 745 SEYDAVERE 753>XP_005267291 Length = 1684 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 SEYDAVE E Sbjct: 752 SEYDAVERE 760>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 SEYDAVE E Sbjct: 850 SEYDAVERE 858>NP_055444 Length = 1344 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 465 SEWDSVEM 472>XP_006725174 Length = 1306 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 427 SEWDSVEM 434>XP_006725173 Length = 1328 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>XP_006725172 Length = 1329 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 450 SEWDSVEM 457>XP_006725171 Length = 1330 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 451 SEWDSVEM 458>XP_006725170 Length = 1345 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 466 SEWDSVEM 473>XP_006725169 Length = 1368 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>XP_006725168 Length = 1368 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 489 SEWDSVEM 496>XP_006725167 Length = 1369 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>XP_005266099 Length = 1306 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 427 SEWDSVEM 434>XP_006716304 Length = 1328 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>XP_006716303 Length = 1329 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 450 SEWDSVEM 457>XP_006716302 Length = 1330 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 451 SEWDSVEM 458>XP_005266098 Length = 1345 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 466 SEWDSVEM 473>XP_005266097 Length = 1368 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>XP_005266096 Length = 1368 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 489 SEWDSVEM 496>XP_006716301 Length = 1369 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SEYDAVEM 8 SE+D+VEM Sbjct: 490 SEWDSVEM 497>NP_001231118 Length = 1644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1334 HDAVEME 1340>NP_001231121 Length = 1504 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1237 HDAVEME 1243>NP_055564 Length = 1472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1205 HDAVEME 1211>NP_001231119 Length = 1533 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1266 HDAVEME 1272>NP_001231120 Length = 1463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1196 HDAVEME 1202>NP_001231122 Length = 1347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1141 HDAVEME 1147>NP_002652 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EYDAVEME 9 +YDAV+M+ Sbjct: 305 KYDAVDMQ 312>NP_004690 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SEYDAVEME 9 + YDAVE E Sbjct: 51 AHYDAVEAE 59>NP_036267 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SEYDAVEME 9 + YDAVE E Sbjct: 51 AHYDAVEAE 59>XP_006720406 Length = 1591 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720405 Length = 1347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720404 Length = 1477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720403 Length = 1486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720402 Length = 1487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720400 Length = 1526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720399 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEME Sbjct: 1281 HDAVEME 1287>NP_071349 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 S+YD+VE Sbjct: 717 SDYDSVE 723>NP_055299 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EYDAVEM 8 +YD VEM Sbjct: 113 DYDVVEM 119>XP_005257625 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 S+YD+VE Sbjct: 693 SDYDSVE 699>XP_005257624 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 S+YD+VE Sbjct: 718 SDYDSVE 724>XP_005245161 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DAVEME 9 DAVEME Sbjct: 257 DAVEME 262>NP_037485 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DAVEME 9 DAVEME Sbjct: 296 DAVEME 301>NP_078934 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 +EYDA+ +E Sbjct: 825 AEYDAMLLE 833>NP_689805 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>NP_001135444 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SEYDAVEME 9 +EYDA+ ++ Sbjct: 113 AEYDALNLQ 121>XP_006720401 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDAVEME 9 +DAVEM+ Sbjct: 1281 HDAVEMD 1287>XP_006720130 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720128 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720127 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_006720126 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_005267433 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205>XP_005267434 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEYDAVE 7 +EYDAV+ Sbjct: 199 AEYDAVK 205Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.114 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 484,571 Number of extensions: 785 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |