Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1935 NP_671714 18 1935 NP_001243888 18 1935 NP_001277 18 1935 XP_006715890 18 1935 XP_005250160 18 1935 XP_005250159 18 1935 NP_005926 16 7355 NP_001160165 16 7355 XP_005250592 16 7355 XP_005263070 16 7355 XP_005263069 16 7355 XP_005263068 16 7355 XP_005263067 16 7355 XP_005263066 16 7355 XP_005263065 16 7355 XP_005263064 16 7355 NP_001724 15 9605 NP_004738 15 9605 XP_006725186 15 9605 XP_006725185 15 9605 XP_006725184 15 9605 XP_006725183 15 9605 XP_006718120 15 9605 XP_006718119 15 9605 XP_006718118 15 9605 XP_005270333 15 9605>NP_005742 Length = 3907 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SESQSSASL 9 S+SQSSASL Sbjct: 1761 SKSQSSASL 1769>NP_671714 Length = 3899 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SESQSSASL 9 S+SQSSASL Sbjct: 1761 SKSQSSASL 1769>NP_001243888 Length = 847 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 SESQSSAS Sbjct: 739 SESQSSAS 746>NP_001277 Length = 869 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 SESQSSAS Sbjct: 761 SESQSSAS 768>XP_006715890 Length = 3860 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SESQSSASL 9 S+SQSSASL Sbjct: 1714 SKSQSSASL 1722>XP_005250160 Length = 3939 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SESQSSASL 9 S+SQSSASL Sbjct: 1793 SKSQSSASL 1801>XP_005250159 Length = 3952 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SESQSSASL 9 S+SQSSASL Sbjct: 1793 SKSQSSASL 1801>NP_005926 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1007 SESQSSKS 1014>NP_001160165 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1014 SESQSSKS 1021>XP_005250592 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 S SQSSAS Sbjct: 1138 SRSQSSAS 1145>XP_005263070 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1014 SESQSSKS 1021>XP_005263069 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1007 SESQSSKS 1014>XP_005263068 Length = 1216 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1012 SESQSSKS 1019>XP_005263067 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1014 SESQSSKS 1021>XP_005263066 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1013 SESQSSKS 1020>XP_005263065 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1014 SESQSSKS 1021>XP_005263064 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQSSAS 8 SESQSS S Sbjct: 1014 SESQSSKS 1021>NP_001724 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ESQSSASL 9 E+QS+ASL Sbjct: 510 EAQSNASL 517>NP_004738 Length = 1919 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1316 SQSQTSAS 1323>XP_006725186 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1316 SQSQTSAS 1323>XP_006725185 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 976 SQSQTSAS 983>XP_006725184 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1304 SQSQTSAS 1311>XP_006725183 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1312 SQSQTSAS 1319>XP_006718120 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1316 SQSQTSAS 1323>XP_006718119 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 976 SQSQTSAS 983>XP_006718118 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1304 SQSQTSAS 1311>XP_005270333 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SESQSSAS 8 S+SQ+SAS Sbjct: 1312 SQSQTSAS 1319Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.256 0.0757 0.140 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 214,405 Number of extensions: 309 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 19 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |