Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_057412 17 4312 NP_940953 17 4312 NP_056453 17 4312 NP_955400 17 4312 XP_005259653 17 4312 XP_006716247 17 4312 XP_005250778 17 4312 XP_006711367 17 4312 XP_005273178 17 4312 NP_064555 17 4312 NP_004706 16 5631 NP_001189433 16 5631 NP_430255 16 5631 NP_001544 16 5631 NP_001240764 16 5631 XP_006722637 16 5631 XP_005266839 16 5631 XP_005244984 16 5631 NP_001424 16 7355 NP_001093869 16 7355 XP_006721832 16 7355 XP_005262709 16 7355 NP_954635 15 9605 NP_000679 15 9605 NP_059509 15 9605 XP_005259084 15 9605 XP_006723316 15 9605 XP_005248564 15 9605 XP_005265002 15 9605 XP_005265001 15 9605 NP_060324 15 9605 NP_005900 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1022 SESQGTAPA 1030>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1022 SESQGTAPA 1030>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1091 SESQGTAPA 1099>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1091 SESQGTAPA 1099>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1032 SESQGTAPA 1040>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1101 SESQGTAPA 1109>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1101 SESQGTAPA 1109>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SESQGTA A Sbjct: 1101 SESQGTAPA 1109>NP_057412 Length = 959 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ESQGTASA 9 +SQGTAS+ Sbjct: 653 DSQGTASS 660>NP_940953 Length = 1907 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SESQGTASA 9 +ESQG+A+A Sbjct: 889 TESQGSAAA 897>NP_056453 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES GTAS Sbjct: 310 SESTGTAS 317>NP_955400 Length = 789 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES GTAS Sbjct: 310 SESTGTAS 317>XP_005259653 Length = 562 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 S SQG+ASA Sbjct: 163 SASQGSASA 171>XP_006716247 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ESQGTASA 9 +SQGTAS+ Sbjct: 332 DSQGTASS 339>XP_005250778 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ESQGTASA 9 +SQGTAS+ Sbjct: 653 DSQGTASS 660>XP_006711367 Length = 1872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SESQGTASA 9 +ESQG+A+A Sbjct: 889 TESQGSAAA 897>XP_005273178 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SESQGTASA 9 +ESQG+A+A Sbjct: 889 TESQGSAAA 897>NP_064555 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 S SQG+ASA Sbjct: 163 SASQGSASA 171>NP_004706 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SES+GT S+ Sbjct: 462 SESEGTKSS 470>NP_001189433 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SES+GT S+ Sbjct: 343 SESEGTKSS 351>NP_430255 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SES+GT S+ Sbjct: 462 SESEGTKSS 470>NP_001544 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SESQGTASA 9 S SQG ASA Sbjct: 251 SNSQGQASA 259>NP_001240764 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SESQGTASA 9 S SQG ASA Sbjct: 251 SNSQGQASA 259>XP_006722637 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SES+GT S+ Sbjct: 361 SESEGTKSS 369>XP_005266839 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SESQGTASA 9 SES+GT S+ Sbjct: 462 SESEGTKSS 470>XP_005244984 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ESQGTAS 8 ES+GTAS Sbjct: 441 ESEGTAS 447>NP_001424 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES GT+S Sbjct: 518 SESSGTSS 525>NP_001093869 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SESQG A+ Sbjct: 1276 SESQGNAT 1283>XP_006721832 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES GT+S Sbjct: 633 SESSGTSS 640>XP_005262709 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SESQG A+ Sbjct: 1276 SESQGNAT 1283>NP_954635 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGTAS 8 SQGTAS Sbjct: 101 SQGTAS 106>NP_000679 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGTAS 8 SQGTAS Sbjct: 101 SQGTAS 106>NP_059509 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QGTASA 9 QGTASA Sbjct: 361 QGTASA 366>XP_005259084 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ESQGTASA 9 E GTASA Sbjct: 80 EDDGTASA 87>XP_006723316 Length = 120 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ESQGTASA 9 E GTASA Sbjct: 101 EDDGTASA 108>XP_005248564 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES+ TAS Sbjct: 968 SESEATAS 975>XP_005265002 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGTAS 8 SQGTAS Sbjct: 101 SQGTAS 106>XP_005265001 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGTAS 8 SQGTAS Sbjct: 118 SQGTAS 123>NP_060324 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ESQGTASA 9 E GTASA Sbjct: 169 EDDGTASA 176>NP_005900 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SESQGTAS 8 SES+ TAS Sbjct: 1094 SESEATAS 1101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.268 0.0845 0.182 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,244 Number of extensions: 354 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 19 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |