Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 299 NP_001185763 20 299 NP_055459 20 299 XP_006726410 20 299 XP_006711719 20 299 XP_006711718 20 299 XP_006711717 20 299 XP_006711716 20 299 XP_006711715 20 299 XP_006711714 20 299 XP_006711713 20 299 XP_006711712 20 299 XP_006711711 20 299 XP_006711710 20 299 XP_006711709 20 299 XP_005277503 20 299 XP_005273038 20 299 XP_006711708 20 299 XP_005277500 20 299 XP_006711707 20 299 XP_005277499 20 299 XP_006711706 20 299 XP_006711705 20 299 XP_006711164 20 299 XP_006710143 20 299 XP_006710142 20 299 XP_006710141 20 299 NP_001239264 18 1482 NP_116255 18 1482 XP_005254784 18 1482 XP_005254783 18 1482 NP_005251 17 4312 NP_001073932 16 5631 NP_001368 16 5631 NP_004548 16 5631 NP_060151 16 5631 XP_005257785 16 5631 XP_006718966 16 5631 NP_115510 16 5631 NP_149094 16 7355 NP_683721 16 7355 NP_003965 16 7355 NP_001139806 16 7355 NP_005986 16 7355 XP_005256713 16 7355 XP_006720059 16 7355 XP_006716474 16 7355 XP_005273738 16 7355 XP_005273737 16 7355 XP_006715737 16 7355 XP_006710034 16 7355 NP_055673 15 9605 NP_001191344 15 9605 NP_001191343 15 9605 NP_114072 15 9605 NP_071447 15 9605 NP_003459 15 9605 NP_777614 15 9605 XP_006713148 15 9605 XP_005245743 15 9605 XP_005271164 15 9605 XP_005271163 15 9605>NP_001185761 Length = 2240 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1511 SEKDQAGLE 1519>NP_001185763 Length = 2362 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1555 SEKDQAGLE 1563>NP_055459 Length = 2346 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1555 SEKDQAGLE 1563>XP_006726410 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1358 SEKDQAGLE 1366>XP_006711719 Length = 2302 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1511 SEKDQAGLE 1519>XP_006711718 Length = 1436 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 562 SEKDQAGLE 570>XP_006711717 Length = 2385 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1511 SEKDQAGLE 1519>XP_006711716 Length = 2411 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1620 SEKDQAGLE 1628>XP_006711715 Length = 2428 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1554 SEKDQAGLE 1562>XP_006711714 Length = 2429 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1555 SEKDQAGLE 1563>XP_006711713 Length = 2432 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1558 SEKDQAGLE 1566>XP_006711712 Length = 2473 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_006711711 Length = 2482 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1608 SEKDQAGLE 1616>XP_006711710 Length = 2494 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1620 SEKDQAGLE 1628>XP_006711709 Length = 2495 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1621 SEKDQAGLE 1629>XP_005277503 Length = 2498 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_005273038 Length = 2509 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_006711708 Length = 2512 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_005277500 Length = 2525 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_006711707 Length = 2553 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_005277499 Length = 2561 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_006711706 Length = 2591 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1717 SEKDQAGLE 1725>XP_006711705 Length = 2592 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1718 SEKDQAGLE 1726>XP_006711164 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 1358 SEKDQAGLE 1366>XP_006710143 Length = 562 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 397 SEKDQAGLE 405>XP_006710142 Length = 671 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 506 SEKDQAGLE 514>XP_006710141 Length = 672 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SERDQAGLE 9 SE+DQAGLE Sbjct: 507 SEKDQAGLE 515>NP_001239264 Length = 1302 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SE+DQAG E Sbjct: 813 SEQDQAGTE 821>NP_116255 Length = 1302 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SE+DQAG E Sbjct: 813 SEQDQAGTE 821>XP_005254784 Length = 1303 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SE+DQAG E Sbjct: 813 SEQDQAGTE 821>XP_005254783 Length = 1303 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SE+DQAG E Sbjct: 813 SEQDQAGTE 821>NP_005251 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ERDQAGL 8 ERD+AGL Sbjct: 55 ERDRAGL 61>NP_001073932 Length = 4314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERDQAGLE 9 E +QAGLE Sbjct: 3110 ETEQAGLE 3117>NP_001368 Length = 4307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERDQAGLE 9 E +QAGLE Sbjct: 3110 ETEQAGLE 3117>NP_004548 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RDQAGL 8 RDQAGL Sbjct: 1796 RDQAGL 1801>NP_060151 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SERDQAGL 8 S RDQ+GL Sbjct: 157 STRDQSGL 164>XP_005257785 Length = 1887 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDQAGLE 9 RDQ GLE Sbjct: 450 RDQQGLE 456>XP_006718966 Length = 4300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERDQAGLE 9 E +QAGLE Sbjct: 3103 ETEQAGLE 3110>NP_115510 Length = 1663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDQAGLE 9 RDQ GLE Sbjct: 284 RDQQGLE 290>NP_149094 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDQAGLE 9 RD+AG+E Sbjct: 163 RDEAGVE 169>NP_683721 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SERDQAGL 8 +ER QAGL Sbjct: 554 AERGQAGL 561>NP_003965 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 ++RD AGL+ Sbjct: 374 ADRDPAGLQ 382>NP_001139806 Length = 1562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERDQAGLE 9 E D+AGLE Sbjct: 1517 EVDEAGLE 1524>NP_005986 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SERDQAGL 8 ++RDQ GL Sbjct: 355 ADRDQGGL 362>XP_005256713 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SERDQAGL 8 SER++AG+ Sbjct: 1036 SEREEAGV 1043>XP_006720059 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SER +AG+E Sbjct: 589 SERCRAGME 597>XP_006716474 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 ++RD AGL+ Sbjct: 220 ADRDPAGLQ 228>XP_005273738 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 ++RD AGL+ Sbjct: 220 ADRDPAGLQ 228>XP_005273737 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 ++RD AGL+ Sbjct: 280 ADRDPAGLQ 288>XP_006715737 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERDQAGLE 9 E D+AGLE Sbjct: 1304 EVDEAGLE 1311>XP_006710034 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SERDQAGLE 9 SER +AG+E Sbjct: 570 SERCRAGME 578>NP_055673 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ERDQAGLE 9 E D AGLE Sbjct: 15 EEDGAGLE 22>NP_001191344 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ERDQAG 7 ERD+AG Sbjct: 194 ERDEAG 199>NP_001191343 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ERDQAG 7 ERD+AG Sbjct: 268 ERDEAG 273>NP_114072 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDQAGLE 9 +D+AGLE Sbjct: 62 QDEAGLE 68>NP_071447 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ERDQAG 7 ERD+AG Sbjct: 299 ERDEAG 304>NP_003459 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDQAGLE 9 +D+AGLE Sbjct: 60 QDEAGLE 66>NP_777614 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SERDQAG 7 SER++AG Sbjct: 1036 SEREEAG 1042>XP_006713148 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SERDQAG 7 +E+DQAG Sbjct: 669 NEQDQAG 675>XP_005245743 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ERDQAGLE 9 E D AGLE Sbjct: 15 EEDGAGLE 22>XP_005271164 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ERDQAG 7 ERD+AG Sbjct: 194 ERDEAG 199>XP_005271163 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ERDQAG 7 ERD+AG Sbjct: 299 ERDEAG 304Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.120 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 592,927 Number of extensions: 955 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |