Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1482 NP_671714 18 1482 XP_006715890 18 1482 XP_005250160 18 1482 XP_005250159 18 1482 NP_001159579 17 3301 NP_005509 17 3301 NP_001137448 17 4312 NP_003381 17 4312 XP_005253176 17 4312 XP_005253175 17 4312 NP_003213 16 5631 NP_055415 16 5631 NP_006786 16 5631 NP_001269373 16 5631 NP_001615 16 5631 NP_937870 16 5631 NP_937872 16 5631 NP_001269374 16 5631 XP_006718487 16 5631 XP_005266896 16 5631 XP_006713970 16 5631 XP_006713968 16 5631 NP_002917 16 5631 NP_001257903 16 7355 XP_006721269 16 7355 XP_006718995 16 7355 XP_005274425 16 7355 XP_006718994 16 7355 XP_006718993 16 7355 XP_005274424 16 7355 XP_005274423 16 7355 NP_203753 16 7355 NP_000161 15 9605 NP_001240628 15 9605 NP_872198 15 9605 NP_056492 15 9605 NP_004746 15 9605 NP_001153069 15 9605 NP_001240630 15 9605 NP_001006600 15 9605 NP_061165 15 9605 NP_001240627 15 9605 NP_001240626 15 9605 XP_006714723 15 9605 XP_005248613 15 9605 XP_005248612 15 9605 XP_005248611 15 9605>NP_005742 Length = 3907 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 SEE TEIIS Sbjct: 2814 SEEVTEIIS 2822>NP_671714 Length = 3899 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 SEE TEIIS Sbjct: 2806 SEEVTEIIS 2814>XP_006715890 Length = 3860 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 SEE TEIIS Sbjct: 2767 SEEVTEIIS 2775>XP_005250160 Length = 3939 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 SEE TEIIS Sbjct: 2846 SEEVTEIIS 2854>XP_005250159 Length = 3952 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 SEE TEIIS Sbjct: 2859 SEEVTEIIS 2867>NP_001159579 Length = 466 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EEFTEIIS 9 EEFTEI++ Sbjct: 416 EEFTEIMN 423>NP_005509 Length = 508 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EEFTEIIS 9 EEFTEI++ Sbjct: 458 EEFTEIMN 465>NP_001137448 Length = 432 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EFTE++ Sbjct: 325 SQEFTELL 332>NP_003381 Length = 646 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EFTE++ Sbjct: 539 SQEFTELL 546>XP_005253176 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EFTE++ Sbjct: 325 SQEFTELL 332>XP_005253175 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EFTE++ Sbjct: 539 SQEFTELL 546>NP_003213 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EEFTEIIS 9 +EFTE++S Sbjct: 360 KEFTELLS 367>NP_055415 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EF+E+I Sbjct: 197 SDEFSEVI 204>NP_006786 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EF+E+I Sbjct: 197 SDEFSEVI 204>NP_001269373 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EF+E+I Sbjct: 197 SDEFSEVI 204>NP_001615 Length = 1723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EEFTEII 8 E+FTEII Sbjct: 698 EKFTEII 704>NP_937870 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 +EEF E+IS Sbjct: 539 AEEFFELIS 547>NP_937872 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 +EEF E+IS Sbjct: 1187 AEEFFELIS 1195>NP_001269374 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EF+E+I Sbjct: 211 SDEFSEVI 218>XP_006718487 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SEEFTEII 8 S+EF+E+I Sbjct: 197 SDEFSEVI 204>XP_005266896 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EEFTEII 8 E+FTEII Sbjct: 1106 EKFTEII 1112>XP_006713970 Length = 646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 +EEF E+IS Sbjct: 386 AEEFFELIS 394>XP_006713968 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 +EEF E+IS Sbjct: 1187 AEEFFELIS 1195>NP_002917 Length = 1376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEEFTEIIS 9 +EEF E+IS Sbjct: 1187 AEEFFELIS 1195>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EFTEII 8 EFTEII Sbjct: 3634 EFTEII 3639>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EFTEII 8 EFTEII Sbjct: 3651 EFTEII 3656>XP_006718995 Length = 2382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 1992 SEEHTEIL 1999>XP_005274425 Length = 2566 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2177 SEEHTEIL 2184>XP_006718994 Length = 2567 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2177 SEEHTEIL 2184>XP_006718993 Length = 2602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2212 SEEHTEIL 2219>XP_005274424 Length = 2614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2225 SEEHTEIL 2232>XP_005274423 Length = 2615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2225 SEEHTEIL 2232>NP_203753 Length = 2601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SEEFTEII 8 SEE TEI+ Sbjct: 2212 SEEHTEIL 2219>NP_000161 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 EEFTEII 8 E+FTE++ Sbjct: 274 EDFTELV 280>NP_001240628 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>NP_872198 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEEFTEI 7 +EEFTE+ Sbjct: 349 AEEFTEM 355>NP_056492 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EFTEIIS 9 EFTEI S Sbjct: 22 EFTEITS 28>NP_004746 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEEFTEI 7 +EEFTE+ Sbjct: 349 AEEFTEM 355>NP_001153069 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EFTEIIS 9 EFTEI S Sbjct: 22 EFTEITS 28>NP_001240630 Length = 1367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>NP_001006600 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>NP_061165 Length = 1371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>NP_001240627 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>NP_001240626 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>XP_006714723 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>XP_005248613 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>XP_005248612 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199>XP_005248611 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SEEFTEI 7 S EFTE+ Sbjct: 193 SNEFTEV 199Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.122 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 502,087 Number of extensions: 1101 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |