Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 390 XP_005250103 20 390 XP_005250102 20 390 NP_003694 17 3301 XP_006713992 17 3301 NP_001026918 17 4312 XP_006719421 17 4312 XP_005268863 17 4312 NP_001093156 16 5631 NP_071336 16 5631 NP_689607 16 7355 XP_005247177 16 7355 XP_005247176 16 7355 XP_006713561 16 7355 NP_976225 15 9605 NP_620074 15 9605 NP_055742 15 9605 NP_008832 15 9605 NP_001124332 15 9605 NP_005446 15 9605 NP_001162119 15 9605 NP_001162120 15 9605 NP_055614 15 9605 NP_001243323 15 9605 NP_689594 15 9605 NP_001098714 15 9605 NP_060418 15 9605 XP_006724785 15 9605 XP_006724783 15 9605 XP_006724782 15 9605 XP_005274525 15 9605 XP_006722401 15 9605 XP_006722400 15 9605 XP_006722399 15 9605 XP_006722398 15 9605 XP_006720604 15 9605 XP_005254461 15 9605 XP_006720603 15 9605 XP_006720602 15 9605 XP_006717236 15 9605 XP_006717235 15 9605 XP_006717234 15 9605 XP_006717233 15 9605 XP_006717232 15 9605 XP_006717231 15 9605 XP_006717230 15 9605 XP_006717229 15 9605 XP_006712319 15 9605 NP_001186073 15 9605 NP_002836 15 9605>NP_004324 Length = 766 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEDSNRMKT 9 SED NRMKT Sbjct: 432 SEDRNRMKT 440>XP_005250103 Length = 758 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEDSNRMKT 9 SED NRMKT Sbjct: 432 SEDRNRMKT 440>XP_005250102 Length = 767 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SEDSNRMKT 9 SED NRMKT Sbjct: 432 SEDRNRMKT 440>NP_003694 Length = 857 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEDSNRMKT 9 ++ SNRMKT Sbjct: 266 AQPSNRMKT 274>XP_006713992 Length = 857 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SEDSNRMKT 9 ++ SNRMKT Sbjct: 266 AQPSNRMKT 274>NP_001026918 Length = 652 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 EDSNRM Sbjct: 511 EDSNRM 516>XP_006719421 Length = 575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 EDSNRM Sbjct: 434 EDSNRM 439>XP_005268863 Length = 575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 EDSNRM Sbjct: 434 EDSNRM 439>NP_001093156 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EDSNRMKT 9 EDS MKT Sbjct: 442 EDSRNMKT 449>NP_071336 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EDSNRMKT 9 EDS MKT Sbjct: 442 EDSRNMKT 449>NP_689607 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 +DS R+KT Sbjct: 370 DDSKRLKT 377>XP_005247177 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 +DS R+KT Sbjct: 370 DDSKRLKT 377>XP_005247176 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 +DS R+KT Sbjct: 224 DDSKRLKT 231>XP_006713561 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 +DS R+KT Sbjct: 323 DDSKRLKT 330>NP_976225 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 EDSN+ K+ Sbjct: 191 EDSNKKKS 198>NP_620074 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 669 QDSNRM 674>NP_055742 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 ED N+MK Sbjct: 453 EDPNKMK 459>NP_008832 Length = 2548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 ED+NRM Sbjct: 2199 EDTNRM 2204>NP_001124332 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 618 QDSNRM 623>NP_005446 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EDSNRMKT 9 EDSN+ K+ Sbjct: 191 EDSNKKKS 198>NP_001162119 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 ED N+MK Sbjct: 453 EDPNKMK 459>NP_001162120 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 ED N+MK Sbjct: 404 EDPNKMK 410>NP_055614 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 348 QDSNRM 353>NP_001243323 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 779 DDSNRFK 785>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEDSNRMK 8 SED ++MK Sbjct: 2649 SEDKDKMK 2656>NP_001098714 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 933 KDENRMK 939>NP_060418 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 847 DDSNRFK 853>XP_006724785 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 618 QDSNRM 623>XP_006724783 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 618 QDSNRM 623>XP_006724782 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 +DSNRM Sbjct: 618 QDSNRM 623>XP_005274525 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 ED N+MK Sbjct: 404 EDPNKMK 410>XP_006722401 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 883 KDENRMK 889>XP_006722400 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 920 KDENRMK 926>XP_006722399 Length = 1477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 945 KDENRMK 951>XP_006722398 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 945 KDENRMK 951>XP_006720604 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 ED+NRM Sbjct: 1328 EDTNRM 1333>XP_005254461 Length = 2600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 ED+NRM Sbjct: 2251 EDTNRM 2256>XP_006720603 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 ED+NRM Sbjct: 2270 EDTNRM 2275>XP_006720602 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EDSNRM 7 ED+NRM Sbjct: 2270 EDTNRM 2275>XP_006717236 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 721 DDSNRFK 727>XP_006717235 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 721 DDSNRFK 727>XP_006717234 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 721 DDSNRFK 727>XP_006717233 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 779 DDSNRFK 785>XP_006717232 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 779 DDSNRFK 785>XP_006717231 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 809 DDSNRFK 815>XP_006717230 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 847 DDSNRFK 853>XP_006717229 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +DSNR K Sbjct: 847 DDSNRFK 853>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEDSNRMK 8 SED ++MK Sbjct: 2408 SEDKDKMK 2415>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEDSNRMK 8 SED ++MK Sbjct: 2427 SEDKDKMK 2434>NP_002836 Length = 1452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EDSNRMK 8 +D NRMK Sbjct: 920 KDENRMK 926Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.102 0.241 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 660,149 Number of extensions: 1241 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |