Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056342 18 1935 XP_005261690 18 1935 NP_003274 17 2528 NP_000332 17 2528 XP_006719124 17 2528 XP_005253405 17 2528 NP_777601 17 2528 NP_001398 17 3301 NP_061115 17 3301 NP_001136325 17 3301 XP_005246152 17 3301 NP_071753 17 3301 NP_055844 17 4312 NP_001139332 17 4312 NP_689634 17 4312 XP_006717017 17 4312 NP_001139333 17 4312 NP_000709 16 5631 NP_001230741 16 5631 XP_005255024 16 5631 XP_005255023 16 5631 XP_006720707 16 5631 NP_073604 16 5631 NP_001952 16 7355 NP_848613 16 7355 NP_054777 16 7355 XP_005256671 16 7355 XP_005254804 16 7355 XP_006720791 16 7355 XP_005254803 16 7355 XP_005254800 16 7355 XP_005254799 16 7355 NP_065908 16 7355 NP_003913 16 7355 NP_001275993 15 9605 NP_000225 15 9605 NP_001275992 15 9605 NP_036597 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001106853 15 9605 NP_001092688 15 9605 XP_003403541 15 9605 XP_006723280 15 9605 XP_006723279 15 9605 XP_005258991 15 9605 XP_006723278 15 9605 XP_005253765 15 9605 XP_005265444 15 9605 XP_006712889 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_005262682 15 9605 XP_003846688 15 9605 NP_001254479 15 9605>NP_056342 Length = 808 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EARSVWIP 9 EAR W+P Sbjct: 57 EARPAWVP 64>XP_005261690 Length = 316 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SEARSVW 7 SEARS+W Sbjct: 14 SEARSLW 20>NP_003274 Length = 278 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARSVWIP 9 ARS W+P Sbjct: 205 ARSAWLP 211>NP_000332 Length = 685 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SEARSVWIP 9 SEA + W+P Sbjct: 520 SEASNTWLP 528>XP_006719124 Length = 1047 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 +EAR +WI Sbjct: 436 NEARDIWI 443>XP_005253405 Length = 1463 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 +EAR +WI Sbjct: 436 NEARDIWI 443>NP_777601 Length = 1453 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 +EAR +WI Sbjct: 426 NEARDIWI 433>NP_001398 Length = 3312 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SEARSVWIP 9 ++AR+ W+P Sbjct: 2776 ADARAAWMP 2784>NP_061115 Length = 224 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARSVWIP 9 ARSVW P Sbjct: 217 ARSVWRP 223>NP_001136325 Length = 222 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARSVWIP 9 ARSVW P Sbjct: 215 ARSVWRP 221>XP_005246152 Length = 195 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARSVWIP 9 ARSVW P Sbjct: 188 ARSVWRP 194>NP_071753 Length = 330 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 EARSVWIP 9 E+R +W+P Sbjct: 270 ESRGLWLP 277>NP_055844 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 SE+R +WI Sbjct: 322 SESRQLWI 329>NP_001139332 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 SE+R +WI Sbjct: 322 SESRQLWI 329>NP_689634 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEARSVW 7 +EA+SVW Sbjct: 192 AEAKSVW 198>XP_006717017 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEARSVW 7 +EA+SVW Sbjct: 195 AEAKSVW 201>NP_001139333 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SEARSVWI 8 SE+R +WI Sbjct: 322 SESRQLWI 329>NP_000709 Length = 2339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEARSVW 7 ++ARSVW Sbjct: 762 AKARSVW 768>NP_001230741 Length = 2237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SEARSVW 7 ++ARSVW Sbjct: 762 AKARSVW 768>XP_005255024 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EARSVW 7 EARS+W Sbjct: 277 EARSLW 282>XP_005255023 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EARSVW 7 EARS+W Sbjct: 277 EARSLW 282>XP_006720707 Length = 445 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EARSVW 7 EARS+W Sbjct: 397 EARSLW 402>NP_073604 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EARSVW 7 EARS+W Sbjct: 277 EARSLW 282>NP_001952 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 SEARSVW 7 +EAR +W Sbjct: 644 AEARKIW 650>NP_848613 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 SEARSVW 7 SEAR W Sbjct: 252 SEAREAW 258>NP_054777 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 SEARSVW 7 S+AR +W Sbjct: 380 SDARDIW 386>XP_005256671 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 SEARSVW 7 SEAR W Sbjct: 252 SEAREAW 258>XP_005254804 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1168 ARSLWI 1173>XP_006720791 Length = 4853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1233 ARSLWI 1238>XP_005254803 Length = 4854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1233 ARSLWI 1238>XP_005254800 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1233 ARSLWI 1238>XP_005254799 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1233 ARSLWI 1238>NP_065908 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 EARSVW 7 EAR VW Sbjct: 394 EARDVW 399>NP_003913 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARSVWI 8 ARS+WI Sbjct: 1233 ARSLWI 1238>NP_001275993 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 421 AEARKTWL 428>NP_000225 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 489 AEARKTWL 496>NP_001275992 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 458 AEARKTWL 465>NP_036597 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 SEAR W+ Sbjct: 915 SEARCDWV 922>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 5740 ARSVW 5744>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 4813 ARSVW 4817>NP_001106853 Length = 2093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RSVWIP 9 RSVW P Sbjct: 1193 RSVWPP 1198>NP_001092688 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 SEARSVW 7 SEA VW Sbjct: 58 SEAEKVW 64>XP_003403541 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EARSVWIP 9 EAR+ W P Sbjct: 134 EARTGWSP 141>XP_006723280 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 83 AEARKTWL 90>XP_006723279 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 489 AEARKTWL 496>XP_005258991 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 459 AEARKTWL 466>XP_006723278 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 SEARSVWI 8 +EAR W+ Sbjct: 488 AEARKTWL 495>XP_005253765 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EARSVWI 8 E+RS WI Sbjct: 9 ESRSQWI 15>XP_005265444 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 29 ARSVW 33>XP_006712889 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RSVWIP 9 RSVW P Sbjct: 1178 RSVWPP 1183>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 5741 ARSVW 5745>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 5741 ARSVW 5745>XP_005262682 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 SEARSVW 7 SEA VW Sbjct: 49 SEAEKVW 55>XP_003846688 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EARSVWIP 9 EAR+ W P Sbjct: 134 EARTGWSP 141>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 ARSVW 7 ARSVW Sbjct: 6057 ARSVW 6061Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.124 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 567,893 Number of extensions: 450 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |