Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1935 NP_653080 18 1935 XP_005267292 18 1935 XP_005267291 18 1935 XP_005267290 18 1935 NP_001161210 17 4312 NP_065176 17 4312 XP_006711674 17 4312 XP_006711673 17 4312 XP_006711672 17 4312 XP_006711671 17 4312 XP_006711670 17 4312 XP_005245629 17 4312 NP_004097 16 5631 NP_055454 16 5631 NP_077816 16 5631 NP_001180308 16 5631 NP_060329 16 5631 XP_006723876 16 5631 XP_006723875 16 5631 XP_006723874 16 5631 XP_006723873 16 5631 XP_006723872 16 5631 XP_005260273 16 5631 XP_006723871 16 5631 XP_006723870 16 5631 XP_006723869 16 5631 XP_005268318 16 5631 NP_004861 16 7355 NP_996790 16 7355 XP_006721661 16 7355 NP_619542 15 9605 NP_002212 15 9605 NP_055105 15 9605 NP_997275 15 9605 NP_612146 15 9605 NP_001231776 15 9605 XP_005274600 15 9605 XP_006717089 15 9605 XP_006717088 15 9605 XP_005273177 15 9605>NP_005091 Length = 1782 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDVPAVVLL 9 SDVPAVV L Sbjct: 841 SDVPAVVPL 849>NP_653080 Length = 1684 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDVPAVVLL 9 SDVPAVV L Sbjct: 743 SDVPAVVPL 751>XP_005267292 Length = 1677 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDVPAVVLL 9 SDVPAVV L Sbjct: 736 SDVPAVVPL 744>XP_005267291 Length = 1684 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDVPAVVLL 9 SDVPAVV L Sbjct: 743 SDVPAVVPL 751>XP_005267290 Length = 1782 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDVPAVVLL 9 SDVPAVV L Sbjct: 841 SDVPAVVPL 849>NP_001161210 Length = 1483 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1226 DVPLVILL 1233>NP_065176 Length = 1877 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1620 DVPLVILL 1627>XP_006711674 Length = 1385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1128 DVPLVILL 1135>XP_006711673 Length = 1549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1292 DVPLVILL 1299>XP_006711672 Length = 1557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1300 DVPLVILL 1307>XP_006711671 Length = 2153 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1896 DVPLVILL 1903>XP_006711670 Length = 2161 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1904 DVPLVILL 1911>XP_005245629 Length = 2164 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP V+LL Sbjct: 1907 DVPLVILL 1914>NP_004097 Length = 86 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VPAVVLL 9 +PAVVLL Sbjct: 2 IPAVVLL 8>NP_055454 Length = 1564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 D PAV+LL Sbjct: 1358 DQPAVILL 1365>NP_077816 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVPA VLL Sbjct: 1144 DVPANVLL 1151>NP_001180308 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 108 DVPWVVLL 115>NP_060329 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 123 DVPWVVLL 130>XP_006723876 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 7 DVPWVVLL 14>XP_006723875 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 7 DVPWVVLL 14>XP_006723874 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 107 DVPWVVLL 114>XP_006723873 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 122 DVPWVVLL 129>XP_006723872 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 123 DVPWVVLL 130>XP_005260273 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 123 DVPWVVLL 130>XP_006723871 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 122 DVPWVVLL 129>XP_006723870 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 123 DVPWVVLL 130>XP_006723869 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVP VVLL Sbjct: 123 DVPWVVLL 130>XP_005268318 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DVPAVVLL 9 DVPA VLL Sbjct: 1144 DVPANVLL 1151>NP_004861 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SDVPAVVL 8 S+VPAVV+ Sbjct: 160 SNVPAVVV 167>NP_996790 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SDVPAVV 7 SDVP VV Sbjct: 123 SDVPGVV 129>XP_006721661 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SDVPAVVL 8 S+VPAVV+ Sbjct: 160 SNVPAVVV 167>NP_619542 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDVPAVVL 8 SDV AV+L Sbjct: 824 SDVTAVIL 831>NP_002212 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SDVPAVVL 8 S++PAV++ Sbjct: 564 SNIPAVII 571>NP_055105 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDVPAVVL 8 +D+P VVL Sbjct: 612 ADIPLVVL 619>NP_997275 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VPAVVLL 9 +PAVVLL Sbjct: 6 LPAVVLL 12>NP_612146 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DVPAVV 7 DVPAV+ Sbjct: 8 DVPAVI 13>NP_001231776 Length = 85 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VPAVVLL 9 +PAVVLL Sbjct: 6 LPAVVLL 12>XP_005274600 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SDVPAVVL 8 SDV AV+L Sbjct: 842 SDVTAVIL 849>XP_006717089 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDVPAVVL 8 +D+P VVL Sbjct: 167 ADIPLVVL 174>XP_006717088 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDVPAVVL 8 +D+P VVL Sbjct: 538 ADIPLVVL 545>XP_005273177 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SDVPAVVL 8 S++PAV++ Sbjct: 564 SNIPAVII 571Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.139 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 605,576 Number of extensions: 930 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |