Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_036586 17 3301 NP_001010927 17 3301 XP_005258050 17 3301 NP_060029 17 3301 NP_001230675 17 4312 NP_060035 17 4312 XP_006722023 17 4312 XP_006722022 17 4312 XP_006722021 17 4312 NP_057412 16 5631 NP_005676 16 5631 NP_001186136 16 5631 XP_006716247 16 5631 XP_005250778 16 5631 XP_006716246 16 5631 XP_005250777 16 5631 XP_006716245 16 5631 NP_000531 16 7355 NP_001036188 16 7355 NP_001121902 16 7355 NP_000386 16 7355 NP_001121901 16 7355 NP_064544 16 7355 NP_001241878 16 7355 XP_005261397 16 7355 XP_006723382 16 7355 XP_006723381 16 7355 XP_006723380 16 7355 XP_006714339 16 7355 XP_006714338 16 7355 NP_001153059 15 9605 NP_001153060 15 9605 NP_598000 15 9605 NP_003820 15 9605 NP_001248335 15 9605 NP_001248336 15 9605 NP_001269723 15 9605 NP_055705 15 9605 NP_001269722 15 9605 NP_001035924 15 9605 NP_878913 15 9605 NP_203748 15 9605 NP_064608 15 9605 NP_001157968 15 9605 XP_005271772 15 9605 XP_005251680 15 9605 XP_006716954 15 9605 XP_006716953 15 9605 XP_006716952 15 9605 XP_006716951 15 9605 XP_006716950 15 9605 XP_006716949 15 9605 XP_006716948 15 9605 XP_005251679 15 9605 XP_005249871 15 9605 XP_005248716 15 9605 XP_006713762 15 9605 XP_006713759 15 9605 XP_006713549 15 9605 NP_060808 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SDEGSMSAF 9 SDEGSM+AF Sbjct: 358 SDEGSMNAF 366>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SDEGSMSAF 9 SDEGSM+AF Sbjct: 358 SDEGSMNAF 366>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SDEGSMSAF 9 SDEGSM+AF Sbjct: 358 SDEGSMNAF 366>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SDEGSMSAF 9 SDEGSM+AF Sbjct: 358 SDEGSMNAF 366>NP_036586 Length = 1701 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SDEGSMSA 8 SDEGS+S+ Sbjct: 1518 SDEGSLSS 1525>NP_001010927 Length = 626 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SDEGSMSA 8 SDEGS+S+ Sbjct: 443 SDEGSLSS 450>XP_005258050 Length = 330 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 SDE S+SAF Sbjct: 82 SDETSISAF 90>NP_060029 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 SDE S+SAF Sbjct: 82 SDETSISAF 90>NP_001230675 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+SAF Sbjct: 199 EGSLSAF 205>NP_060035 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+SAF Sbjct: 337 EGSLSAF 343>XP_006722023 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+SAF Sbjct: 337 EGSLSAF 343>XP_006722022 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+SAF Sbjct: 199 EGSLSAF 205>XP_006722021 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+SAF Sbjct: 337 EGSLSAF 343>NP_057412 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>NP_005676 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>NP_001186136 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 503 SDKGSMS 509>XP_006716247 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 150 SDKGSMS 156>XP_005250778 Length = 805 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_006716246 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_005250777 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>XP_006716245 Length = 960 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDEGSMS 7 SD+GSMS Sbjct: 471 SDKGSMS 477>NP_000531 Length = 5038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDEGSMSAF 9 SD GS +AF Sbjct: 1170 SDSGSETAF 1178>NP_001036188 Length = 5033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDEGSMSAF 9 SD GS +AF Sbjct: 1170 SDSGSETAF 1178>NP_001121902 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 1010 DEGSMPA 1016>NP_000386 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GSMSAF 9 GSMSAF Sbjct: 498 GSMSAF 503>NP_001121901 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 1010 DEGSMPA 1016>NP_064544 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 1008 DEGSMPA 1014>NP_001241878 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 578 DEGSMPA 584>XP_005261397 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GSMSAF 9 GSMSAF Sbjct: 504 GSMSAF 509>XP_006723382 Length = 5027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDEGSMSAF 9 SD GS +AF Sbjct: 1170 SDSGSETAF 1178>XP_006723381 Length = 5031 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDEGSMSAF 9 SD GS +AF Sbjct: 1169 SDSGSETAF 1177>XP_006723380 Length = 5032 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SDEGSMSAF 9 SD GS +AF Sbjct: 1170 SDSGSETAF 1178>XP_006714339 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 777 DEGSMPA 783>XP_006714338 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DEGSMSA 8 DEGSM A Sbjct: 980 DEGSMPA 986>NP_001153059 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DEGSMSAF 9 ++GS SAF Sbjct: 970 EDGSFSAF 977>NP_001153060 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DEGSMSAF 9 ++GS SAF Sbjct: 893 EDGSFSAF 900>NP_598000 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DEGSMSAF 9 ++GS SAF Sbjct: 970 EDGSFSAF 977>NP_003820 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1796 EGSLSSF 1802>NP_001248335 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1792 EGSLSSF 1798>NP_001248336 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1763 EGSLSSF 1769>NP_001269723 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 599 NDEGSVLSF 607>NP_055705 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 599 NDEGSVLSF 607>NP_001269722 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 415 NDEGSVLSF 423>NP_001035924 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 839 NDEGSVLSF 847>NP_878913 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 839 NDEGSVLSF 847>NP_203748 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SDEGSMS 7 S EGSMS Sbjct: 627 SSEGSMS 633>NP_064608 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS++AF Sbjct: 385 EGSLAAF 391>NP_001157968 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 69 EGSLSSF 75>XP_005271772 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SDEGSMS 7 S EGSMS Sbjct: 628 SSEGSMS 634>XP_005251680 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1755 EGSLSSF 1761>XP_006716954 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1763 EGSLSSF 1769>XP_006716953 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1786 EGSLSSF 1792>XP_006716952 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1792 EGSLSSF 1798>XP_006716951 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1796 EGSLSSF 1802>XP_006716950 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1825 EGSLSSF 1831>XP_006716949 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1825 EGSLSSF 1831>XP_006716948 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1825 EGSLSSF 1831>XP_005251679 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 1825 EGSLSSF 1831>XP_005249871 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS++AF Sbjct: 53 EGSLAAF 59>XP_005248716 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DEGSMSAF 9 ++GS SAF Sbjct: 970 EDGSFSAF 977>XP_006713762 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 113 EGSLSSF 119>XP_006713759 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 113 EGSLSSF 119>XP_006713549 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDEGSMSAF 9 +DEGS+ +F Sbjct: 599 NDEGSVLSF 607>NP_060808 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EGSMSAF 9 EGS+S+F Sbjct: 69 EGSLSSF 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.113 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 586,130 Number of extensions: 670 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |