Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_001231892 16 5631 NP_001104488 16 5631 NP_001104489 16 5631 NP_660093 16 5631 NP_892009 16 5631 XP_005253271 16 5631 XP_006718431 16 5631 XP_006718430 16 5631 XP_006718429 16 5631 XP_006718428 16 5631 XP_006718427 16 5631 NP_004490 16 5631 NP_112556 16 5631 NP_079321 16 7355 NP_001171559 16 7355 NP_003889 16 7355 NP_061330 16 7355 NP_004506 16 7355 NP_001254738 16 7355 NP_619636 16 7355 XP_005261808 16 7355 XP_005267257 16 7355 XP_005267256 16 7355 XP_005267255 16 7355 XP_005267254 16 7355 XP_006715654 16 7355 NP_733751 15 9605 NP_001071107 15 9605 NP_060148 15 9605 XP_005259057 15 9605 XP_005259056 15 9605 XP_006723307 15 9605 XP_005259055 15 9605 XP_006716142 15 9605 XP_005250088 15 9605 XP_006716141 15 9605 XP_005250085 15 9605 XP_006716140 15 9605 XP_005250084 15 9605 XP_005250083 15 9605 XP_005250082 15 9605 NP_059128 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1149 SDATVKKKP 1157>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1149 SDATVKKKP 1157>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1218 SDATVKKKP 1226>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1218 SDATVKKKP 1226>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1159 SDATVKKKP 1167>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1228 SDATVKKKP 1236>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1228 SDATVKKKP 1236>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SDATVK KP Sbjct: 1228 SDATVKKKP 1236>NP_001231892 Length = 2488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 1019 SDSGIKMEP 1027>NP_001104488 Length = 2365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 932 SDSGIKMEP 940>NP_001104489 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 82 SDSGIKMEP 90>NP_660093 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 996 SDSGIKMEP 1004>NP_892009 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 996 SDSGIKMEP 1004>XP_005253271 Length = 1481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 82 SDSGIKMEP 90>XP_006718431 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 82 SDSGIKMEP 90>XP_006718430 Length = 1551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 82 SDSGIKMEP 90>XP_006718429 Length = 2416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 947 SDSGIKMEP 955>XP_006718428 Length = 2455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 1019 SDSGIKMEP 1027>XP_006718427 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SDATVKMKP 9 SD+ +KM+P Sbjct: 996 SDSGIKMEP 1004>NP_004490 Length = 285 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DATVKMKP 9 D T+KM P Sbjct: 98 DCTIKMDP 105>NP_112556 Length = 332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DATVKMKP 9 D T+KM P Sbjct: 98 DCTIKMDP 105>NP_079321 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATVKMKP 9 ATVK++P Sbjct: 511 ATVKLRP 517>NP_001171559 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1157 SDGTKAMKP 1165>NP_003889 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1394 SDGTKAMKP 1402>NP_061330 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATVKMKP 9 ATVK++P Sbjct: 493 ATVKLRP 499>NP_004506 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDATVKM 7 SDATVK+ Sbjct: 169 SDATVKI 175>NP_001254738 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SDATVKM 7 SDATVK+ Sbjct: 131 SDATVKI 137>NP_619636 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ATVKMKP 9 ATVK KP Sbjct: 104 ATVKCKP 110>XP_005261808 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ATVKMKP 9 ATVK++P Sbjct: 511 ATVKLRP 517>XP_005267257 Length = 909 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 807 SDGTKAMKP 815>XP_005267256 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1011 SDGTKAMKP 1019>XP_005267255 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1063 SDGTKAMKP 1071>XP_005267254 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1341 SDGTKAMKP 1349>XP_006715654 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SDATVKMKP 9 SD T MKP Sbjct: 1393 SDGTKAMKP 1401>NP_733751 Length = 4911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4328 TVKLKP 4333>NP_001071107 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATVKMK 8 ATVKMK Sbjct: 333 ATVKMK 338>NP_060148 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ATVKMK 8 ATVKMK Sbjct: 49 ATVKMK 54>XP_005259057 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDATVKMK 8 SD+T K+K Sbjct: 109 SDSTAKLK 116>XP_005259056 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDATVKMK 8 SD+T K+K Sbjct: 109 SDSTAKLK 116>XP_006723307 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDATVKMK 8 SD+T K+K Sbjct: 124 SDSTAKLK 131>XP_005259055 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDATVKMK 8 SD+T K+K Sbjct: 124 SDSTAKLK 131>XP_006716142 Length = 4927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4344 TVKLKP 4349>XP_005250088 Length = 4928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4345 TVKLKP 4350>XP_006716141 Length = 4959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4376 TVKLKP 4381>XP_005250085 Length = 4979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4400 TVKLKP 4405>XP_006716140 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4399 TVKLKP 4404>XP_005250084 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4399 TVKLKP 4404>XP_005250083 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4399 TVKLKP 4404>XP_005250082 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TVKMKP 9 TVK+KP Sbjct: 4400 TVKLKP 4405>NP_059128 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SDATVKMK 8 SD+T K+K Sbjct: 109 SDSTAKLK 116Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.113 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,478 Number of extensions: 769 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |