Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 18 1482 NP_733762 18 1482 XP_006713860 18 1482 XP_006713859 18 1482 XP_005247910 18 1482 XP_005247909 18 1482 NP_001274679 17 2528 NP_001598 17 2528 XP_006713185 17 2528 NP_001129673 16 5631 NP_001243694 16 5631 NP_078986 16 5631 XP_006717509 16 5631 NP_001004715 16 5631 NP_001444 16 7355 NP_848627 16 7355 NP_001107033 16 7355 NP_066288 16 7355 XP_005254968 16 7355 XP_005254967 16 7355 XP_006720570 16 7355 XP_006714654 16 7355 XP_006714653 16 7355 XP_006714652 16 7355 NP_006113 16 7355 NP_056099 15 9605 NP_057726 15 9605 NP_006035 15 9605 NP_055558 15 9605 NP_001094060 15 9605 NP_064710 15 9605 XP_005272625 15 9605 XP_006724588 15 9605 XP_005272623 15 9605 XP_005272622 15 9605 XP_005272621 15 9605 XP_005255493 15 9605 XP_006721128 15 9605 XP_005255492 15 9605 XP_005254495 15 9605 XP_006713998 15 9605 XP_006713997 15 9605 XP_005245669 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605 NP_612400 15 9605 NP_001073277 15 9605>NP_005179 Length = 906 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 216 SSGLEAMAL 224>NP_733762 Length = 982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 208 SSGLEAMAL 216>XP_006713860 Length = 914 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 236 SSGLEAMAL 244>XP_006713859 Length = 966 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 236 SSGLEAMAL 244>XP_005247910 Length = 982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 208 SSGLEAMAL 216>XP_005247909 Length = 1010 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 S GLEAMAL Sbjct: 236 SSGLEAMAL 244>NP_001274679 Length = 476 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SCGLEAMAL 9 +CG +AMAL Sbjct: 5 ACGTKAMAL 13>NP_001598 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SCGLEAMAL 9 +CG+E+M+L Sbjct: 147 ACGVESMSL 155>XP_006713185 Length = 364 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SCGLEAMAL 9 +CG+E+M+L Sbjct: 147 ACGVESMSL 155>NP_001129673 Length = 205 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CGLEAMA 8 CG+EA A Sbjct: 107 CGIEAQA 113>NP_001243694 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SCGLEAMA 8 SCG AMA Sbjct: 30 SCGAAAMA 37>NP_078986 Length = 221 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CGLEAMA 8 CG+EA A Sbjct: 107 CGIEAQA 113>XP_006717509 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SCGLEAMA 8 SCG AMA Sbjct: 30 SCGAAAMA 37>NP_001004715 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SCGLEAMAL 9 SC +EAM L Sbjct: 26 SCRMEAMKL 34>NP_001444 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 C L+AM+L Sbjct: 395 CNLQAMSL 402>NP_848627 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 CGLEA ++ Sbjct: 312 CGLEAASV 319>NP_001107033 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 CGLEA ++ Sbjct: 312 CGLEAASV 319>NP_066288 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SCGLEAMA 8 +CG EAM+ Sbjct: 506 NCGREAMS 513>XP_005254968 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CGLEAMAL 9 CGLEA L Sbjct: 1089 CGLEAKNL 1096>XP_005254967 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CGLEAMAL 9 CGLEA L Sbjct: 1108 CGLEAKNL 1115>XP_006720570 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CGLEAMAL 9 CGLEA L Sbjct: 1114 CGLEAKNL 1121>XP_006714654 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 CGLEA ++ Sbjct: 312 CGLEAASV 319>XP_006714653 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 CGLEA ++ Sbjct: 312 CGLEAASV 319>XP_006714652 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CGLEAMAL 9 CGLEA ++ Sbjct: 312 CGLEAASV 319>NP_006113 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CGLEAMAL 9 CGLEA L Sbjct: 1083 CGLEAKNL 1090>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 1186 SCSLEAL 1192>NP_057726 Length = 3674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CGLEA 6 CGLEA Sbjct: 1869 CGLEA 1873>NP_006035 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 425 SCALEAL 431>NP_055558 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CGLEAM 7 CG++AM Sbjct: 50 CGIDAM 55>NP_001094060 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CGLEAM 7 CG++AM Sbjct: 50 CGIDAM 55>NP_064710 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SCGLEAMAL 9 SC LEA+ L Sbjct: 108 SCRLEAVPL 116>XP_005272625 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 425 SCALEAL 431>XP_006724588 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 425 SCALEAL 431>XP_005272623 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 425 SCALEAL 431>XP_005272622 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 425 SCALEAL 431>XP_005272621 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 471 SCALEAL 477>XP_005255493 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SCGLEAMAL 9 SC LEA+ L Sbjct: 108 SCRLEAVPL 116>XP_006721128 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SCGLEAMAL 9 SC LEA+ L Sbjct: 108 SCRLEAVPL 116>XP_005255492 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SCGLEAMAL 9 SC LEA+ L Sbjct: 108 SCRLEAVPL 116>XP_005254495 Length = 3694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CGLEA 6 CGLEA Sbjct: 1889 CGLEA 1893>XP_006713998 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CGLEAM 7 CG++AM Sbjct: 50 CGIDAM 55>XP_006713997 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CGLEAM 7 CG++AM Sbjct: 50 CGIDAM 55>XP_005245669 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CGLEA 6 CGLEA Sbjct: 71 CGLEA 75>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 951 SCSLEAL 957>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 1243 SCSLEAL 1249>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SCGLEAM 7 SC LEA+ Sbjct: 1264 SCSLEAL 1270>NP_612400 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CGLEA 6 CGLEA Sbjct: 71 CGLEA 75>NP_001073277 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CGLEA 6 CGLEA Sbjct: 71 CGLEA 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.129 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,290 Number of extensions: 281 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |