Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_077017 17 4312 NP_065783 16 7355 NP_059989 16 7355 XP_006715590 16 7355 XP_005267126 16 7355 XP_006715589 16 7355 XP_006715588 16 7355 XP_006715587 16 7355 XP_006715586 16 7355 XP_006714629 16 7355 NP_001073291 15 9605 NP_000417 15 9605 NP_058627 15 9605 NP_001137309 15 9605 NP_689914 15 9605 NP_001165088 15 9605 NP_001165074 15 9605 NP_001165077 15 9605 NP_001035845 15 9605 NP_006027 15 9605 NP_006218 15 9605 NP_872617 15 9605 NP_001035844 15 9605 NP_001229849 15 9605 NP_001165084 15 9605 NP_001229850 15 9605 XP_005260496 15 9605 XP_006718913 15 9605 XP_006718911 15 9605 XP_006718910 15 9605 XP_005267039 15 9605 XP_005267038 15 9605 XP_005264717 15 9605 XP_005264716 15 9605 XP_005264715 15 9605 XP_005264714 15 9605 XP_005264712 15 9605 XP_005264711 15 9605 XP_006712215 15 9605 XP_006712214 15 9605 XP_005264710 15 9605 NP_001005190 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVLN MLD Sbjct: 1594 SAVLNGMLD 1602>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVLN MLD Sbjct: 1594 SAVLNGMLD 1602>NP_077017 Length = 83 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVLNSMLD 9 A +NSMLD Sbjct: 29 AAINSMLD 36>NP_065783 Length = 2249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2228 SAVLNSLV 2235>NP_059989 Length = 2236 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2215 SAVLNSLV 2222>XP_006715590 Length = 2277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2256 SAVLNSLV 2263>XP_005267126 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2295 SAVLNSLV 2302>XP_006715589 Length = 2320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2299 SAVLNSLV 2306>XP_006715588 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2309 SAVLNSLV 2316>XP_006715587 Length = 2359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2338 SAVLNSLV 2345>XP_006715586 Length = 2373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLNS++ Sbjct: 2352 SAVLNSLV 2359>XP_006714629 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAVLNSML 8 SAVLN+M+ Sbjct: 31 SAVLNAMV 38>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVL+ +LD Sbjct: 1904 SAVLDGILD 1912>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVL+ +LD Sbjct: 1904 SAVLDGILD 1912>NP_058627 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SAVLNSMLD 9 +++LN++LD Sbjct: 439 ASILNTLLD 447>NP_001137309 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SAVLNSMLD 9 +++LN++LD Sbjct: 415 ASILNTLLD 423>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 3180 NGLLNSLLD 3188>NP_001165088 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 499 VLNTMMD 505>NP_001165074 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_001165077 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_001035845 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 522 VLNTMMD 528>NP_006027 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_006218 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 193 TVLLNSLLD 201>NP_872617 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 141 TVLLNSLLD 149>NP_001035844 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 526 VLNTMMD 532>NP_001229849 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 98 TVLLNSLLD 106>NP_001165084 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 499 VLNTMMD 505>NP_001229850 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 105 TVLLNSLLD 113>XP_005260496 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 + +LNS+LD Sbjct: 213 TVLLNSLLD 221>XP_006718913 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SAVLNSMLD 9 +++LN++LD Sbjct: 414 ASILNTLLD 422>XP_006718911 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SAVLNSMLD 9 +++LN++LD Sbjct: 439 ASILNTLLD 447>XP_006718910 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SAVLNSMLD 9 +++LN++LD Sbjct: 460 ASILNTLLD 468>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVL+ +LD Sbjct: 1992 SAVLDGILD 2000>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAVLNSMLD 9 SAVL+ +LD Sbjct: 1992 SAVLDGILD 2000>XP_005264717 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264716 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264715 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 499 VLNTMMD 505>XP_005264714 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264712 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264711 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_006712215 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_006712214 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>XP_005264710 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLNSMLD 9 VLN+M+D Sbjct: 588 VLNTMMD 594>NP_001005190 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AVLNSML 8 +VLNSML Sbjct: 152 SVLNSML 158Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.120 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 303,858 Number of extensions: 404 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |