Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 665 XP_005273257 19 665 NP_056442 19 869 NP_005531 17 2528 XP_006710684 17 2528 XP_006710683 17 2528 XP_006710682 17 2528 XP_005270893 17 2528 XP_005270892 17 2528 XP_005270890 17 2528 NP_659570 17 3301 XP_005250299 17 3301 XP_006715978 17 3301 XP_006715977 17 3301 XP_006715976 17 3301 XP_006715975 17 3301 NP_055384 17 3301 NP_006428 17 4312 NP_612463 17 4312 NP_036442 16 5631 NP_004578 16 5631 NP_001036041 16 5631 NP_001331 16 7355 NP_710142 16 7355 NP_001188267 15 9605 NP_001188269 15 9605 NP_002958 15 9605 NP_001188268 15 9605 NP_001276065 15 9605 NP_004778 15 9605 NP_001276064 15 9605 NP_149082 15 9605 NP_148977 15 9605 NP_001265398 15 9605 NP_001265400 15 9605 NP_001265399 15 9605 NP_001265401 15 9605 NP_055841 15 9605 NP_055464 15 9605 NP_997297 15 9605 XP_006722902 15 9605 XP_005268792 15 9605 XP_005268791 15 9605 XP_005268789 15 9605 XP_005268788 15 9605 XP_005248271 15 9605 XP_006714049 15 9605 XP_005248268 15 9605 XP_006711160 15 9605>NP_064450 Length = 1722 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SATEQEDL 8 SATEQEDL Sbjct: 188 SATEQEDL 195>XP_005273257 Length = 1726 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SATEQEDL 8 SATEQEDL Sbjct: 188 SATEQEDL 195>NP_056442 Length = 308 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 S TEQ+DLF Sbjct: 298 SGTEQDDLF 306>NP_005531 Length = 913 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 763 NAVQQEDLF 771>XP_006710684 Length = 794 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 644 NAVQQEDLF 652>XP_006710683 Length = 693 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 543 NAVQQEDLF 551>XP_006710682 Length = 720 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 570 NAVQQEDLF 578>XP_005270893 Length = 749 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 599 NAVQQEDLF 607>XP_005270892 Length = 801 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 763 NAVQQEDLF 771>XP_005270890 Length = 911 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 +A +QEDLF Sbjct: 761 NAVQQEDLF 769>NP_659570 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>XP_005250299 Length = 766 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>XP_006715978 Length = 766 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>XP_006715977 Length = 838 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>XP_006715976 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>XP_006715975 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>NP_055384 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SATEQEDLF 9 ++ EQEDLF Sbjct: 18 TSQEQEDLF 26>NP_006428 Length = 1724 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SATEQED 7 SATE+ED Sbjct: 122 SATEEED 128>NP_612463 Length = 212 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SATEQEDLF 9 S EQ+DLF Sbjct: 82 STEEQQDLF 90>NP_036442 Length = 1232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ATEQEDLF 9 +TEQE++F Sbjct: 58 STEQEEVF 65>NP_004578 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ATEQED 7 ATEQED Sbjct: 277 ATEQED 282>NP_001036041 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ATEQED 7 ATEQED Sbjct: 277 ATEQED 282>NP_001331 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SATEQED 7 SATE ED Sbjct: 174 SATESED 180>NP_710142 Length = 899 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SATEQEDL 8 S TE+EDL Sbjct: 473 SETEREDL 480>NP_001188267 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 256 EEEDLF 261>NP_001188269 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 187 EEEDLF 192>NP_002958 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 256 EEEDLF 261>NP_001188268 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 256 EEEDLF 261>NP_001276065 Length = 1521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1400 EEEDLF 1405>NP_004778 Length = 1529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1408 EEEDLF 1413>NP_001276064 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1404 EEEDLF 1409>NP_149082 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 186 EEEDLF 191>NP_148977 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 212 EEEDLF 217>NP_001265398 Length = 1675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>NP_001265400 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>NP_001265399 Length = 1711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>NP_001265401 Length = 1645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 455 STEQQDL 461>NP_055841 Length = 1717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>NP_055464 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 255 EEEDLF 260>NP_997297 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATEQEDLF 9 ATE ED++ Sbjct: 178 ATELEDIY 185>XP_006722902 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 256 EEEDLF 261>XP_005268792 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 455 STEQQDL 461>XP_005268791 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 455 STEQQDL 461>XP_005268789 Length = 1712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>XP_005268788 Length = 1718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATEQEDL 8 +TEQ+DL Sbjct: 527 STEQQDL 533>XP_005248271 Length = 1404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1283 EEEDLF 1288>XP_006714049 Length = 1509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1388 EEEDLF 1393>XP_005248268 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EQEDLF 9 E+EDLF Sbjct: 1412 EEEDLF 1417>XP_006711160 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TEQEDLF 9 T+QED F Sbjct: 277 TQQEDAF 283Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.118 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 685,472 Number of extensions: 695 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |