Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_789765 20 390 NP_001123914 20 390 NP_005334 20 390 NP_004976 20 390 NP_203524 20 390 NP_002515 20 390 XP_006725199 20 390 XP_006719132 20 390 XP_006718280 20 390 NP_001078518 18 1135 NP_036351 18 1135 NP_001239019 18 1135 XP_005247286 18 1135 XP_005247285 18 1135 NP_055568 17 2528 XP_005271906 17 2528 XP_006718144 17 2528 XP_005271905 17 2528 XP_005271904 17 2528 XP_005271903 17 2528 NP_660335 17 4312 NP_689967 17 4312 XP_006715926 17 4312 XP_006715925 17 4312 NP_001138552 16 5631 XP_005257293 16 5631 NP_065979 16 7355 NP_001035517 16 7355 NP_573439 16 7355 NP_573438 16 7355 NP_001181930 16 7355 NP_005695 16 7355 NP_005317 16 7355 NP_001273178 16 7355 XP_006710336 16 7355 XP_006710335 16 7355 XP_006710334 16 7355 XP_006710333 16 7355 XP_006710332 16 7355 NP_003622 15 9605>NP_789765 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_001123914 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_005334 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_004976 Length = 188 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_203524 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_002515 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>XP_006725199 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>XP_006719132 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>XP_006718280 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM DQYMR Sbjct: 65 SAMRDQYMR 73>NP_001078518 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM +QYMR Sbjct: 75 SAMREQYMR 83>NP_036351 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM +QYMR Sbjct: 75 SAMREQYMR 83>NP_001239019 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM +QYMR Sbjct: 75 SAMREQYMR 83>XP_005247286 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM +QYMR Sbjct: 75 SAMREQYMR 83>XP_005247285 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SAMTDQYMR 9 SAM +QYMR Sbjct: 75 SAMREQYMR 83>NP_055568 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271906 Length = 879 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 473 MTDQYM 478>XP_006718144 Length = 886 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271905 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271904 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 410 MTDQYM 415>XP_005271903 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTDQYM 8 MTDQYM Sbjct: 473 MTDQYM 478>NP_660335 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 SAMT Y+R Sbjct: 374 SAMTHNYLR 382>NP_689967 Length = 777 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMTDQYM 8 S MTD+Y+ Sbjct: 193 SVMTDEYL 200>XP_006715926 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 SAMT Y+R Sbjct: 374 SAMTHNYLR 382>XP_006715925 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 SAMT Y+R Sbjct: 374 SAMTHNYLR 382>NP_001138552 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 SAM QY+R Sbjct: 202 SAMEKQYLR 210>XP_005257293 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 SAM QY+R Sbjct: 202 SAMEKQYLR 210>NP_065979 Length = 1215 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SAMTDQY 7 +AMTD+Y Sbjct: 431 TAMTDKY 437>NP_001035517 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AMTDQYM 8 A+TD YM Sbjct: 8 ALTDNYM 14>NP_573439 Length = 1436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1225 AALTDSYTR 1233>NP_573438 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1231 AALTDSYTR 1239>NP_001181930 Length = 1433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1222 AALTDSYTR 1230>NP_005695 Length = 1446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1235 AALTDSYTR 1243>NP_005317 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AMTDQYM 8 A+TD YM Sbjct: 56 ALTDNYM 62>NP_001273178 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AMTDQYM 8 A+TD YM Sbjct: 56 ALTDNYM 62>XP_006710336 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 966 AALTDSYTR 974>XP_006710335 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1159 AALTDSYTR 1167>XP_006710334 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1081 AALTDSYTR 1089>XP_006710333 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1228 AALTDSYTR 1236>XP_006710332 Length = 1442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 +A+TD Y R Sbjct: 1231 AALTDSYTR 1239>NP_003622 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAMTDQYMR 9 S +TD +MR Sbjct: 408 SKITDHFMR 416Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.117 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,267 Number of extensions: 307 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |