Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_067047 17 2528 XP_006717281 17 2528 XP_006717280 17 2528 XP_006717279 17 2528 XP_006717278 17 2528 XP_006717277 17 2528 XP_006717276 17 2528 XP_006717275 17 2528 XP_006717274 17 2528 XP_006717273 17 2528 XP_006717272 17 2528 NP_005076 17 3301 XP_005272276 17 3301 XP_005272275 17 3301 XP_005272273 17 3301 NP_001129521 17 4312 NP_149018 17 4312 NP_001138863 16 5631 NP_060367 16 5631 NP_001252538 16 5631 NP_001036111 16 5631 NP_005564 16 5631 NP_055780 16 5631 NP_001252537 16 5631 XP_006713280 16 5631 XP_006713279 16 5631 XP_006713092 16 5631 XP_005265019 16 5631 XP_005265017 16 5631 XP_005265016 16 5631 XP_005265015 16 5631 XP_005265014 16 5631 NP_001070865 16 7355 NP_892017 16 7355 XP_006710008 16 7355 NP_078966 15 9605 NP_001180451 15 9605 NP_001180453 15 9605 NP_001180452 15 9605 NP_078795 15 9605 NP_689678 15 9605 XP_006723004 15 9605 XP_005257989 15 9605 XP_006721787 15 9605 XP_005257987 15 9605 XP_005257986 15 9605 XP_005257985 15 9605 XP_006721786 15 9605 XP_005257984 15 9605 XP_006721333 15 9605 XP_006721332 15 9605 NP_112217 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAMATSTPI 9 S+MATSTPI Sbjct: 1502 SSMATSTPI 1510>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAMATSTPI 9 S+MATSTPI Sbjct: 1297 SSMATSTPI 1305>NP_067047 Length = 2506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717281 Length = 1702 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717280 Length = 2221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717279 Length = 2506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717278 Length = 2566 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717277 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717276 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717275 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717274 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717273 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>XP_006717272 Length = 2567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MATSTP+ Sbjct: 988 MATSTPV 994>NP_005076 Length = 2090 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 592 TAAATSTPV 600>XP_005272276 Length = 2036 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 537 TAAATSTPV 545>XP_005272275 Length = 2083 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 633 TAAATSTPV 641>XP_005272273 Length = 2132 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 633 TAAATSTPV 641>NP_001129521 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AMATSTPI 9 A ATSTP+ Sbjct: 49 ASATSTPV 56>NP_149018 Length = 655 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AMATSTPI 9 A ATSTP+ Sbjct: 49 ASATSTPV 56>NP_001138863 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 263 NAHATSTPL 271>NP_060367 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 346 NAHATSTPL 354>NP_001252538 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 568 LATSTPV 574>NP_001036111 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 642 LATSTPV 648>NP_005564 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 MAT+TP+ Sbjct: 1 MATATPV 7>NP_055780 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 584 LATSTPV 590>NP_001252537 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 642 LATSTPV 648>XP_006713280 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 71 NAHATSTPL 79>XP_006713279 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 +A ATSTP+ Sbjct: 346 NAHATSTPL 354>XP_006713092 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 642 LATSTPV 648>XP_005265019 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 642 LATSTPV 648>XP_005265017 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 642 LATSTPV 648>XP_005265016 Length = 849 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 538 LATSTPV 544>XP_005265015 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 568 LATSTPV 574>XP_005265014 Length = 895 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MATSTPI 9 +ATSTP+ Sbjct: 584 LATSTPV 590>NP_001070865 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 S++ATS P+ Sbjct: 480 SSLATSAPL 488>NP_892017 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAMATSTPI 9 S++ATS P+ Sbjct: 496 SSLATSAPL 504>XP_006710008 Length = 2014 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SAMATSTP 8 S+M+T+TP Sbjct: 1551 SSMSTTTP 1558>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATSTPI 9 ATSTP+ Sbjct: 12044 ATSTPV 12049>NP_001180451 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 775 AMAVQTPV 782>NP_001180453 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 785 AMAVQTPV 792>NP_001180452 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 791 AMAVQTPV 798>NP_078795 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 771 AMAVQTPV 778>NP_689678 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 174 TSMATGTP 181>XP_006723004 Length = 6443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATSTPI 9 ATSTP+ Sbjct: 3980 ATSTPV 3985>XP_005257989 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 176 TSMATGTP 183>XP_006721787 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 102 TSMATGTP 109>XP_005257987 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 102 TSMATGTP 109>XP_005257986 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 102 TSMATGTP 109>XP_005257985 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 102 TSMATGTP 109>XP_006721786 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 199 TSMATGTP 206>XP_005257984 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAMATSTP 8 ++MAT TP Sbjct: 202 TSMATGTP 209>XP_006721333 Length = 1238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 791 AMAVQTPV 798>XP_006721332 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AMATSTPI 9 AMA TP+ Sbjct: 791 AMAVQTPV 798>NP_112217 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AMATSTP 8 +M+TSTP Sbjct: 1040 SMSTSTP 1046Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.102 0.254 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,367 Number of extensions: 417 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |