Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 19 869 XP_005251512 19 869 NP_036222 16 7355 XP_006712115 16 7355 XP_006710603 16 7355 XP_006710602 16 7355 XP_006710601 16 7355 XP_006710600 16 7355 XP_005270757 16 7355 XP_006710599 16 7355 XP_006710598 16 7355 XP_006710597 16 7355 XP_006710596 16 7355 XP_006710595 16 7355 XP_006710594 16 7355 XP_006710593 16 7355 XP_006710592 16 7355 XP_006710591 16 7355 XP_006710590 16 7355 XP_006710589 16 7355 XP_006710588 16 7355 XP_006710587 16 7355 XP_006710586 16 7355 XP_006710585 16 7355 XP_005270755 16 7355 XP_006710584 16 7355 XP_005270754 16 7355 XP_005270753 16 7355 XP_006710583 16 7355 XP_005270752 16 7355 XP_006710582 16 7355 XP_005270751 16 7355 NP_064507 16 7355 NP_001166126 15 9605 NP_060730 15 9605 NP_001073351 15 9605 NP_001073350 15 9605 NP_001073349 15 9605 NP_057541 15 9605 XP_005258773 15 9605>NP_004963 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ALMSETER 9 ALMSETER Sbjct: 86 ALMSETER 93>XP_005251512 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ALMSETER 9 ALMSETER Sbjct: 86 ALMSETER 93>NP_036222 Length = 5430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 1663 SALQQETEK 1671>XP_006712115 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MSETER 9 MSETER Sbjct: 309 MSETER 314>XP_006710603 Length = 5324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 1663 SALQQETEK 1671>XP_006710602 Length = 7391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3730 SALQQETEK 3738>XP_006710601 Length = 4720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710600 Length = 5384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 1663 SALQQETEK 1671>XP_005270757 Length = 5460 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 1823 SALQQETEK 1831>XP_006710599 Length = 5656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 1823 SALQQETEK 1831>XP_006710598 Length = 7553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3720 SALQQETEK 3728>XP_006710597 Length = 7451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3730 SALQQETEK 3738>XP_006710596 Length = 7512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3679 SALQQETEK 3687>XP_006710595 Length = 7526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3693 SALQQETEK 3701>XP_006710594 Length = 7528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3695 SALQQETEK 3703>XP_006710593 Length = 7539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3706 SALQQETEK 3714>XP_006710592 Length = 7544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3711 SALQQETEK 3719>XP_006710591 Length = 7558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3725 SALQQETEK 3733>XP_006710590 Length = 7563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3730 SALQQETEK 3738>XP_006710589 Length = 7595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3762 SALQQETEK 3770>XP_006710588 Length = 7614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710587 Length = 7645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3812 SALQQETEK 3820>XP_006710586 Length = 7645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710585 Length = 7657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_005270755 Length = 7663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710584 Length = 7686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_005270754 Length = 7694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_005270753 Length = 7700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710583 Length = 7702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_005270752 Length = 7717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_006710582 Length = 7720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>XP_005270751 Length = 7723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SALMSETER 9 SAL ETE+ Sbjct: 3890 SALQQETEK 3898>NP_064507 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MSETER 9 MSETER Sbjct: 301 MSETER 306>NP_001166126 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSETER 9 LMS TER Sbjct: 185 LMSSTER 191>NP_060730 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LMSETER 9 LMS TER Sbjct: 119 LMSSTER 125>NP_001073351 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALMSETE 8 SALM E+E Sbjct: 181 SALMDESE 188>NP_001073350 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALMSETE 8 SALM E+E Sbjct: 338 SALMDESE 345>NP_001073349 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALMSETE 8 SALM E+E Sbjct: 338 SALMDESE 345>NP_057541 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALMSETE 8 SALM E+E Sbjct: 338 SALMDESE 345>XP_005258773 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALMSETE 8 SALM E+E Sbjct: 181 SALMDESE 188Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.103 0.223 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 293,605 Number of extensions: 271 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |