Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 XP_005266703 18 1482 NP_689846 17 3301 NP_001018123 17 3301 NP_064627 17 3301 XP_006713327 17 3301 XP_006713325 17 3301 XP_006713324 17 3301 XP_005265385 17 3301 NP_008877 16 7355 NP_066022 16 7355 NP_003119 16 7355 XP_006723369 16 7355 XP_005274250 16 7355 XP_006718734 16 7355 XP_006718733 16 7355 XP_005274249 16 7355 XP_006712150 16 7355 XP_005264574 16 7355 NP_001020029 15 9605 NP_001252541 15 9605 NP_057368 15 9605 NP_996882 15 9605 NP_001096645 15 9605 NP_005874 15 9605 NP_000338 15 9605 XP_006722673 15 9605 XP_006722672 15 9605 XP_006722671 15 9605 XP_006722670 15 9605 XP_005259532 15 9605 XP_005255192 15 9605 XP_006720913 15 9605 XP_006720304 15 9605 XP_005268080 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SALADRRES 9 SALAD RES Sbjct: 1305 SALADSRES 1313>XP_005266703 Length = 1501 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SALADRRES 9 SALAD RES Sbjct: 636 SALADSRES 644>NP_689846 Length = 859 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SALADRRES 9 +AL+DRRE+ Sbjct: 800 AALSDRREN 808>NP_001018123 Length = 859 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SALADRRES 9 +AL+DRRE+ Sbjct: 800 AALSDRREN 808>NP_064627 Length = 1388 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SALADRRES 9 SAL DR ES Sbjct: 1021 SALVDREES 1029>XP_006713327 Length = 1023 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SALADRRES 9 SAL DR ES Sbjct: 656 SALVDREES 664>XP_006713325 Length = 1195 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SALADRRES 9 SAL DR ES Sbjct: 1021 SALVDREES 1029>XP_006713324 Length = 1285 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SALADRRES 9 SAL DR ES Sbjct: 1021 SALVDREES 1029>XP_005265385 Length = 1291 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SALADRRES 9 SAL DR ES Sbjct: 924 SALVDREES 932>NP_008877 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 50 ALADEREA 57>NP_066022 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 54 ALADEREA 61>NP_003119 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 47 ALADEREA 54>XP_006723369 Length = 2394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 54 ALADEREA 61>XP_005274250 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006718734 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006718733 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_005274249 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 50 ALADEREA 57>XP_006712150 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 47 ALADEREA 54>XP_005264574 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALADRRES 9 ALAD RE+ Sbjct: 47 ALADEREA 54>NP_001020029 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALADRRE 8 ALAD RE Sbjct: 47 ALADERE 53>NP_001252541 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 586 AALASRRE 593>NP_057368 Length = 2376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 586 AALASRRE 593>NP_996882 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 586 AALASRRE 593>NP_001096645 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SALADRRES 9 SAL+DR E+ Sbjct: 402 SALSDRDEA 410>NP_005874 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 948 AALASRRE 955>NP_000338 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALADRRE 8 ALAD RE Sbjct: 47 ALADERE 53>XP_006722673 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 947 AALASRRE 954>XP_006722672 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 948 AALASRRE 955>XP_006722671 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 948 AALASRRE 955>XP_006722670 Length = 2326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 971 AALASRRE 978>XP_005259532 Length = 2327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SALADRRE 8 +ALA RRE Sbjct: 972 AALASRRE 979>XP_005255192 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SALADRRES 9 SAL+DR E+ Sbjct: 402 SALSDRDEA 410>XP_006720913 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SALADRRES 9 SAL+DR E+ Sbjct: 402 SALSDRDEA 410>XP_006720304 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALADRRE 8 ALAD RE Sbjct: 47 ALADERE 53>XP_005268080 Length = 2328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ALADRRE 8 ALAD RE Sbjct: 47 ALADERE 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.113 0.263 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 401,250 Number of extensions: 520 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |