Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 665 NP_004561 19 665 NP_001275703 19 665 XP_005253450 19 665 XP_006719151 19 665 NP_055174 17 3301 NP_055365 17 4312 NP_059346 16 5631 NP_001032405 16 5631 NP_059348 16 5631 NP_004593 16 5631 NP_059347 16 5631 XP_005260586 16 5631 XP_005260585 16 5631 XP_005260584 16 5631 XP_005260583 16 5631 XP_005260582 16 5631 XP_006723932 16 5631 XP_006723931 16 5631 XP_006723930 16 5631 XP_006723929 16 5631 XP_005260581 16 5631 XP_006723928 16 5631 NP_068370 16 7355 NP_001129631 16 7355 NP_001129630 16 7355 NP_001129629 16 7355 NP_060072 16 7355 XP_005278099 16 7355 XP_005272679 16 7355 XP_006724600 16 7355 XP_005278096 16 7355 NP_000089 15 9605 NP_000121 15 9605 NP_444283 15 9605 NP_065910 15 9605 NP_003584 15 9605 XP_005258103 15 9605 XP_006717768 15 9605 XP_006717767 15 9605 XP_005271861 15 9605 XP_005263222 15 9605 XP_005263221 15 9605 XP_005263220 15 9605 XP_006714345 15 9605 XP_005263219 15 9605 XP_005270541 15 9605 NP_001092142 15 9605 NP_001269795 15 9605>NP_001275701 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 SAI+PAKST Sbjct: 1221 SAISPAKST 1229>NP_004561 Length = 1445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 SAI+PAKST Sbjct: 1180 SAISPAKST 1188>NP_001275703 Length = 1264 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 SAI+PAKST Sbjct: 999 SAISPAKST 1007>XP_005253450 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 SAI+PAKST Sbjct: 1221 SAISPAKST 1229>XP_006719151 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 SAI+PAKST Sbjct: 1221 SAISPAKST 1229>NP_055174 Length = 332 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SAINPAKST 9 ++I+PAKST Sbjct: 87 TSISPAKST 95>NP_055365 Length = 1032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AINPAKST 9 A+NPAK T Sbjct: 41 ALNPAKLT 48>NP_059346 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 361 AAPNPAKAT 369>NP_001032405 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 367 AAPNPAKAT 375>NP_059348 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 361 AAPNPAKAT 369>NP_004593 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 361 AAPNPAKAT 369>NP_059347 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 442 AAPNPAKAT 450>XP_005260586 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 361 AAPNPAKAT 369>XP_005260585 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 367 AAPNPAKAT 375>XP_005260584 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 367 AAPNPAKAT 375>XP_005260583 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 367 AAPNPAKAT 375>XP_005260582 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 407 AAPNPAKAT 415>XP_006723932 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 407 AAPNPAKAT 415>XP_006723931 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 407 AAPNPAKAT 415>XP_006723930 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 442 AAPNPAKAT 450>XP_006723929 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 448 AAPNPAKAT 456>XP_005260581 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 448 AAPNPAKAT 456>XP_006723928 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 +A NPAK+T Sbjct: 448 AAPNPAKAT 456>NP_068370 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SAINPAKST 9 S ++P+KST Sbjct: 111 SRVSPSKST 119>NP_001129631 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 115 SVVNPNKAT 123>NP_001129630 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 332 SVVNPNKAT 340>NP_001129629 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 332 SVVNPNKAT 340>NP_060072 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 337 SVVNPNKAT 345>XP_005278099 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 120 SVVNPNKAT 128>XP_005272679 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 332 SVVNPNKAT 340>XP_006724600 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 337 SVVNPNKAT 345>XP_005278096 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 S +NP K+T Sbjct: 337 SVVNPNKAT 345>NP_000089 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INPAKS 8 +NPAKS Sbjct: 178 LNPAKS 183>NP_000121 Length = 2224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SAINPAK 7 SA+NP K Sbjct: 1732 SAVNPEK 1738>NP_444283 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INPAKS 8 +NPAKS Sbjct: 233 LNPAKS 238>NP_065910 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 237 LSPAKST 243>NP_003584 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AINPAK 7 A+NPAK Sbjct: 347 ALNPAK 352>XP_005258103 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AINPAK 7 A+NPAK Sbjct: 347 ALNPAK 352>XP_006717768 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AINPAKST 9 A+ PAK+T Sbjct: 139 ALKPAKNT 146>XP_006717767 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AINPAKST 9 A+ PAK+T Sbjct: 139 ALKPAKNT 146>XP_005271861 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AINPAKST 9 A+ PAK+T Sbjct: 139 ALKPAKNT 146>XP_005263222 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 61 LSPAKST 67>XP_005263221 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 61 LSPAKST 67>XP_005263220 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 61 LSPAKST 67>XP_006714345 Length = 1961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 202 LSPAKST 208>XP_005263219 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INPAKST 9 ++PAKST Sbjct: 237 LSPAKST 243>XP_005270541 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INPAKS 8 +NPAKS Sbjct: 178 LNPAKS 183>NP_001092142 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SAINPAKST 9 SA++P K T Sbjct: 542 SAVDPIKDT 550>NP_001269795 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AINPAKST 9 A+ PAK+T Sbjct: 139 ALKPAKNT 146Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.291 0.102 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 618,566 Number of extensions: 500 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |