Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 869 NP_001035957 19 869 XP_006721990 19 869 XP_006721989 19 869 XP_005258041 19 869 XP_006721988 19 869 XP_006721987 19 869 XP_006721986 19 869 XP_005258040 19 869 XP_006721985 19 869 NP_001393 17 4312 NP_001139008 17 4312 NP_001070254 16 5631 XP_006718388 16 5631 XP_006718387 16 5631 XP_006718386 16 5631 NP_056487 16 5631 NP_001136245 15 9605 NP_001136239 15 9605 NP_001136236 15 9605 NP_001136244 15 9605 NP_001136277 15 9605 NP_001136278 15 9605 NP_001136238 15 9605 NP_001136240 15 9605 NP_001136243 15 9605 NP_001136242 15 9605 NP_001136235 15 9605 NP_001136237 15 9605 NP_005620 15 9605 NP_001136241 15 9605 NP_149045 15 9605 NP_001165375 15 9605 NP_055518 15 9605 NP_612146 15 9605 NP_001258975 15 9605 NP_075068 15 9605 NP_001245323 15 9605 XP_006718013 15 9605 XP_005276812 15 9605 XP_005276811 15 9605 XP_006713490 15 9605 XP_005276810 15 9605 XP_005276809 15 9605 XP_006713489 15 9605 XP_005276808 15 9605 NP_631981 15 9605>NP_000258 Length = 2818 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2311 SAGTALLEQ 2319>NP_001035957 Length = 2839 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2332 SAGTALLEQ 2340>XP_006721990 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2342 SAGTALLEQ 2350>XP_006721989 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2342 SAGTALLEQ 2350>XP_005258041 Length = 2836 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2311 SAGTALLEQ 2319>XP_006721988 Length = 2846 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2321 SAGTALLEQ 2329>XP_006721987 Length = 2849 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2342 SAGTALLEQ 2350>XP_006721986 Length = 2854 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2329 SAGTALLEQ 2337>XP_005258040 Length = 2857 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2332 SAGTALLEQ 2340>XP_006721985 Length = 2867 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAGT LLEQ Sbjct: 2342 SAGTALLEQ 2350>NP_001393 Length = 462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAGTTLLE 8 ++GTTLLE Sbjct: 223 ASGTTLLE 230>NP_001139008 Length = 190 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SAGTTLLE 8 S GTTLLE Sbjct: 85 SFGTTLLE 92>NP_001070254 Length = 1735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 16 ASGTTLLPQ 24>XP_006718388 Length = 1331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 79 ASGTTLLPQ 87>XP_006718387 Length = 1798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 79 ASGTTLLPQ 87>XP_006718386 Length = 1822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 79 ASGTTLLPQ 87>NP_056487 Length = 1639 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SAGTTLLE 8 +AG+TLLE Sbjct: 1142 TAGSTLLE 1149>NP_001136245 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136239 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 797 AGTTILQ 803>NP_001136236 Length = 1957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136244 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136277 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 468 ASGTTLLWQ 476>NP_001136278 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 363 ASGTTLLWQ 371>NP_001136238 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136240 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136243 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136242 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136235 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136237 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 763 AGTTILQ 769>NP_005620 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 ++GTTLL Q Sbjct: 478 ASGTTLLWQ 486>NP_001136241 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 846 AGTTILQ 852>NP_149045 Length = 1955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001165375 Length = 1506 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_055518 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_612146 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SAGTTLL 7 S GTTLL Sbjct: 301 SGGTTLL 307>NP_001258975 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SAGTTL 6 SAGTTL Sbjct: 351 SAGTTL 356>NP_075068 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 511 TTLLEQ 516>NP_001245323 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SAGTTLLEQ 9 SAG +LL+Q Sbjct: 40 SAGGSLLQQ 48>XP_006718013 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGTTLLE 8 AGTT+L+ Sbjct: 834 AGTTILQ 840>XP_005276812 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276811 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_006713490 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276810 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276809 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_006713489 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>XP_005276808 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 15 TTLLEQ 20>NP_631981 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLLEQ 9 TTLLEQ Sbjct: 511 TTLLEQ 516Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.114 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 535,882 Number of extensions: 614 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |