Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_113662 19 869 XP_005253855 19 869 XP_005253854 19 869 XP_005253853 19 869 NP_003738 18 1935 XP_006716326 18 1935 NP_536799 17 4312 NP_054860 17 4312 NP_006827 17 4312 NP_001073880 17 4312 XP_006722724 17 4312 XP_005259839 17 4312 XP_006722723 17 4312 XP_006722722 17 4312 XP_006715982 17 4312 NP_000675 16 5631 NP_079511 16 5631 NP_055884 16 5631 NP_001258549 16 5631 XP_006721884 16 5631 XP_005257286 16 5631 XP_005255914 16 5631 XP_005255913 16 5631 XP_005255912 16 5631 XP_006721234 16 5631 XP_005270242 16 5631 NP_001229766 16 7355 NP_036437 16 7355 XP_006724942 16 7355 XP_006718223 16 7355 XP_006718222 16 7355 XP_006710331 16 7355 NP_570603 16 7355 NP_055018 16 7355 NP_631914 16 7355 NP_002011 15 9605 NP_891555 15 9605 NP_000207 15 9605 NP_001186746 15 9605 NP_076956 15 9605 NP_001186745 15 9605 NP_001186744 15 9605 NP_073617 15 9605 NP_112489 15 9605 NP_443100 15 9605 NP_115971 15 9605 NP_001193594 15 9605 NP_005551 15 9605 XP_005274558 15 9605 XP_006723859 15 9605 XP_006719839 15 9605 XP_006718069 15 9605 XP_005270268 15 9605 XP_006718068 15 9605 XP_005270267 15 9605 XP_006718067 15 9605 XP_005270266 15 9605 XP_005270265 15 9605 XP_005263016 15 9605 XP_006711694 15 9605 XP_005245671 15 9605 NP_699202 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGCLARLQ 9 SAGCLA LQ Sbjct: 2877 SAGCLASLQ 2885>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SAGCLARLQ 9 SAGCLA LQ Sbjct: 2877 SAGCLASLQ 2885>NP_113662 Length = 281 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SAGCLARL 8 SAGCL+RL Sbjct: 185 SAGCLSRL 192>XP_005253855 Length = 279 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SAGCLARL 8 SAGCL+RL Sbjct: 185 SAGCLSRL 192>XP_005253854 Length = 281 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SAGCLARL 8 SAGCL+RL Sbjct: 185 SAGCLSRL 192>XP_005253853 Length = 294 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SAGCLARL 8 SAGCL+RL Sbjct: 185 SAGCLSRL 192>NP_003738 Length = 1327 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCLAR+Q Sbjct: 814 GCLARVQ 820>XP_006716326 Length = 1316 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCLAR+Q Sbjct: 814 GCLARVQ 820>NP_536799 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 SAGCLA Sbjct: 21 SAGCLA 26>NP_054860 Length = 1331 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCL+R+Q Sbjct: 1177 GCLSRVQ 1183>NP_006827 Length = 2671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SAGCLARL 8 SAGCL L Sbjct: 2446 SAGCLGEL 2453>NP_001073880 Length = 673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAGCLARLQ 9 S GC +RLQ Sbjct: 598 SFGCASRLQ 606>XP_006722724 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAGCLARLQ 9 S GC +RLQ Sbjct: 563 SFGCASRLQ 571>XP_005259839 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAGCLARLQ 9 S GC +RLQ Sbjct: 563 SFGCASRLQ 571>XP_006722723 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAGCLARLQ 9 S GC +RLQ Sbjct: 597 SFGCASRLQ 605>XP_006722722 Length = 684 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SAGCLARLQ 9 S GC +RLQ Sbjct: 609 SFGCASRLQ 617>XP_006715982 Length = 827 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCL+R+Q Sbjct: 673 GCLSRVQ 679>NP_000675 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SAGCLAR 7 ++GCLAR Sbjct: 411 ASGCLAR 417>NP_079511 Length = 1166 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCLAR++ Sbjct: 656 GCLARVK 662>NP_055884 Length = 1284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 1093 AGCMAR 1098>NP_001258549 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 1033 AGCMAR 1038>XP_006721884 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 S+GCL R+ Sbjct: 450 SSGCLTRV 457>XP_005257286 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 S+GCL R+ Sbjct: 551 SSGCLTRV 558>XP_005255914 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 976 AGCMAR 981>XP_005255913 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 1033 AGCMAR 1038>XP_005255912 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 1095 AGCMAR 1100>XP_006721234 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGCLAR 7 AGC+AR Sbjct: 1108 AGCMAR 1113>XP_005270242 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GCLARLQ 9 GCLAR++ Sbjct: 224 GCLARVK 230>NP_001229766 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 903 GCLLRLE 909>NP_036437 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 902 GCLLRLE 908>XP_006724942 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 SAGC+A Sbjct: 595 SAGCMA 600>XP_006718223 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 904 GCLLRLE 910>XP_006718222 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 905 GCLLRLE 911>XP_006710331 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 SAGC+A Sbjct: 595 SAGCMA 600>NP_570603 Length = 955 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 918 GCLLRLE 924>NP_055018 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GCL RL+ Sbjct: 940 GCLLRLE 946>NP_631914 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLARLQ 9 CLAR+Q Sbjct: 214 CLARIQ 219>NP_002011 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 1238 GCLAR 1242>NP_891555 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 1238 GCLAR 1242>NP_000207 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 S+GCLA Sbjct: 19 SSGCLA 24>NP_001186746 Length = 94 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLARLQ 9 C+ARLQ Sbjct: 42 CVARLQ 47>NP_076956 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLARLQ 9 C+ARLQ Sbjct: 42 CVARLQ 47>NP_001186745 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLARLQ 9 C+ARLQ Sbjct: 42 CVARLQ 47>NP_001186744 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLARLQ 9 C+ARLQ Sbjct: 42 CVARLQ 47>NP_073617 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 SAGC+A Sbjct: 287 SAGCVA 292>NP_112489 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 175 AAGCVATL 182>NP_443100 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 185 GCLAR 189>NP_115971 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GC +R+Q Sbjct: 640 GCFSRMQ 646>NP_001193594 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 185 GCLAR 189>NP_005551 Length = 3695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SAGCLARL 8 SAGC A L Sbjct: 3112 SAGCTADL 3119>XP_005274558 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SAGCLA 6 S+GCLA Sbjct: 19 SSGCLA 24>XP_006723859 Length = 3700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SAGCLARL 8 SAGC A L Sbjct: 3112 SAGCTADL 3119>XP_006719839 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 382 GCLAR 386>XP_006718069 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 175 AAGCVATL 182>XP_005270268 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_006718068 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_005270267 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_006718067 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_005270266 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_005270265 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SAGCLARL 8 +AGC+A L Sbjct: 76 AAGCVATL 83>XP_005263016 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GCLARLQ 9 GC AR+Q Sbjct: 325 GCPARIQ 331>XP_006711694 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 168 GCLAR 172>XP_005245671 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 185 GCLAR 189>NP_699202 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GCLAR 7 GCLAR Sbjct: 505 GCLAR 509Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.132 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 586,470 Number of extensions: 799 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |