Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_073747 16 5631 NP_001026 16 5631 NP_065770 16 5631 XP_006711873 16 5631 XP_006711872 16 5631 XP_006711871 16 5631 XP_006711870 16 5631 XP_006711869 16 5631 XP_006711868 16 5631 XP_006711867 16 5631 XP_006711866 16 5631 XP_006711865 16 5631 XP_005271187 16 5631 NP_056080 16 7355 NP_001165980 16 7355 NP_001165988 16 7355 NP_065128 16 7355 NP_001135943 16 7355 NP_004710 16 7355 XP_006719755 16 7355 XP_005269287 16 7355 XP_005263206 16 7355 XP_005263205 16 7355 XP_005246453 16 7355 XP_006712435 16 7355 NP_001268713 15 9605 NP_001268710 15 9605 NP_001226 15 9605 NP_001193943 15 9605 NP_001276881 15 9605 NP_001276880 15 9605 NP_001008401 15 9605 XP_005253860 15 9605 XP_006718792 15 9605 XP_006718791 15 9605 XP_006718790 15 9605>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 773 SADISKADV 781>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 773 SADISKADV 781>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 SAD SKADV Sbjct: 774 SADISKADV 782>NP_073747 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SADKSKAD 8 SAD+S+AD Sbjct: 360 SADQSQAD 367>NP_001026 Length = 4967 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>NP_065770 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ADKSKADV 9 AD+ KADV Sbjct: 1103 ADEDKADV 1110>XP_006711873 Length = 4954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711872 Length = 2735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711871 Length = 4906 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711870 Length = 4965 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711869 Length = 4973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711868 Length = 4975 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711867 Length = 4977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711866 Length = 4984 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_006711865 Length = 4985 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DKSKADV 9 DK KADV Sbjct: 318 DKEKADV 324>XP_005271187 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SADKSKAD 8 SAD+S+AD Sbjct: 234 SADQSQAD 241>NP_056080 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SADKSKA 7 +ADKSKA Sbjct: 719 NADKSKA 725>NP_001165980 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SADKSKA 7 +ADKSKA Sbjct: 719 NADKSKA 725>NP_001165988 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SADKSKA 7 +ADKSKA Sbjct: 719 NADKSKA 725>NP_065128 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADKSKADV 9 ADK K+D+ Sbjct: 101 ADKMKSDI 108>NP_001135943 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADKSKADV 9 ADK K+D+ Sbjct: 101 ADKMKSDI 108>NP_004710 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SADKSKAD 8 SAD SK D Sbjct: 1367 SADSSKTD 1374>XP_006719755 Length = 1418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SADKSKAD 8 SAD SK D Sbjct: 1322 SADSSKTD 1329>XP_005269287 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SADKSKAD 8 SAD SK D Sbjct: 1431 SADSSKTD 1438>XP_005263206 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADKSKADV 9 ADK K+D+ Sbjct: 101 ADKMKSDI 108>XP_005263205 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADKSKADV 9 ADK K+D+ Sbjct: 101 ADKMKSDI 108>XP_005246453 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SADKSKA 7 +ADKSKA Sbjct: 661 NADKSKA 667>XP_006712435 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SADKSKA 7 +ADKSKA Sbjct: 719 NADKSKA 725>NP_001268713 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 S D+SKA++ Sbjct: 467 STDRSKAEM 475>NP_001268710 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SADKSKADV 9 S D+SKA++ Sbjct: 467 STDRSKAEM 475>NP_001226 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DKSKADV 9 DK+KAD+ Sbjct: 331 DKNKADL 337>NP_001193943 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DKSKADV 9 DK+KAD+ Sbjct: 331 DKNKADL 337>NP_001276881 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ADKSKADV 9 ADK K DV Sbjct: 239 ADKYKCDV 246>NP_001276880 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ADKSKADV 9 ADK K DV Sbjct: 239 ADKYKCDV 246>NP_001008401 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ADKSKADV 9 ADK K DV Sbjct: 239 ADKYKCDV 246>XP_005253860 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SADKSKAD 8 S+DKS+ D Sbjct: 244 SSDKSRGD 251>XP_006718792 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DKSKADV 9 DK+KAD+ Sbjct: 331 DKNKADL 337>XP_006718791 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DKSKADV 9 DK+KAD+ Sbjct: 331 DKNKADL 337>XP_006718790 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DKSKADV 9 DK+KAD+ Sbjct: 331 DKNKADL 337Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.103 0.236 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,457 Number of extensions: 718 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |