Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_598397 17 4312 NP_004728 17 4312 NP_203747 17 4312 NP_115272 17 4312 NP_061750 17 4312 NP_001271324 17 4312 NP_001269058 17 4312 NP_064597 17 4312 XP_006724438 17 4312 XP_005261889 17 4312 XP_005261888 17 4312 XP_006722212 17 4312 XP_005258116 17 4312 XP_005258115 17 4312 NP_997320 16 5631 NP_061759 16 5631 XP_005253612 16 5631 NP_055507 16 7355 NP_006085 16 7355 NP_001157743 16 7355 NP_872584 16 7355 NP_061757 16 7355 XP_005273432 16 7355 XP_005273431 16 7355 NP_001165783 15 9605 NP_694984 15 9605 NP_002661 15 9605 NP_001138791 15 9605 NP_775885 15 9605 NP_001269266 15 9605 NP_001269267 15 9605 NP_001004060 15 9605 NP_001399 15 9605 NP_001165806 15 9605 NP_001129497 15 9605 NP_005023 15 9605 NP_001004067 15 9605 XP_006725258 15 9605 XP_006724701 15 9605 XP_005262172 15 9605 XP_005262170 15 9605 XP_005255375 15 9605 XP_006713725 15 9605 XP_006713724 15 9605 XP_006713723 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 NP_055102 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2436 RYTVKVQRE 2444>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 1088 RYTVKVQRE 1096>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2088 RYTVKVQRE 2096>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2430 RYTVKVQRE 2438>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2436 RYTVKVQRE 2444>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2436 RYTVKVQRE 2444>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYTVNVQRE 9 RYTV VQRE Sbjct: 2436 RYTVKVQRE 2444>NP_598397 Length = 756 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RYT + QRE Sbjct: 53 RYTASSQRE 61>NP_004728 Length = 756 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RYT + QRE Sbjct: 53 RYTASSQRE 61>NP_203747 Length = 1423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RY +NV RE Sbjct: 335 RYILNVTRE 343>NP_115272 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RYTVNVQ 7 RYT+N++ Sbjct: 314 RYTINIE 320>NP_061750 Length = 929 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RYTVNVQ 7 RYT+N++ Sbjct: 314 RYTINIE 320>NP_001271324 Length = 658 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RYTVNVQRE 9 RY++++QRE Sbjct: 646 RYSLSLQRE 654>NP_001269058 Length = 1450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RY +NV RE Sbjct: 362 RYILNVTRE 370>NP_064597 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RYTVNVQRE 9 RY++++QRE Sbjct: 674 RYSLSLQRE 682>XP_006724438 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RYT + QRE Sbjct: 53 RYTASSQRE 61>XP_005261889 Length = 756 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RYT + QRE Sbjct: 53 RYTASSQRE 61>XP_005261888 Length = 756 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RYT + QRE Sbjct: 53 RYTASSQRE 61>XP_006722212 Length = 1401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RY +NV RE Sbjct: 313 RYILNVTRE 321>XP_005258116 Length = 1430 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RY +NV RE Sbjct: 342 RYILNVTRE 350>XP_005258115 Length = 1450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYTVNVQRE 9 RY +NV RE Sbjct: 362 RYILNVTRE 370>NP_997320 Length = 4471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RYTVNVQR 8 RYT +QR Sbjct: 703 RYTAGIQR 710>NP_061759 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YTVNVQ 7 YTVN+Q Sbjct: 317 YTVNIQ 322>XP_005253612 Length = 4589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RYTVNVQR 8 RYT +QR Sbjct: 821 RYTAGIQR 828>NP_055507 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RYTVNVQR 8 +YT NV+R Sbjct: 151 QYTANVKR 158>NP_006085 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVNVQR 8 TVNVQR Sbjct: 644 TVNVQR 649>NP_001157743 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVNVQR 8 TVNVQR Sbjct: 570 TVNVQR 575>NP_872584 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVNVQR 8 TVNVQR Sbjct: 1081 TVNVQR 1086>NP_061757 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 YTVNVQ 7 YT+N+Q Sbjct: 315 YTINIQ 320>XP_005273432 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVNVQR 8 TVNVQR Sbjct: 678 TVNVQR 683>XP_005273431 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVNVQR 8 TVNVQR Sbjct: 1081 TVNVQR 1086>NP_001165783 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>NP_694984 Length = 1802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YTVNVQRE 9 Y+VN+Q++ Sbjct: 966 YSVNLQKQ 973>NP_002661 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>NP_001138791 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>NP_775885 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382>NP_001269266 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 491 RYTLNV 496>NP_001269267 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 459 RYTLNV 464>NP_001004060 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YTVNVQRE 9 YTVNV + Sbjct: 717 YTVNVNED 724>NP_001165806 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 477 RYTLNV 482>NP_001129497 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 504 RYTLNV 509>NP_005023 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 504 RYTLNV 509>NP_001004067 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_006725258 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_006724701 Length = 1398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YTVNVQRE 9 Y+VN+Q++ Sbjct: 562 YSVNLQKQ 569>XP_005262172 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YTVNVQRE 9 Y+VN+Q++ Sbjct: 795 YSVNLQKQ 802>XP_005262170 Length = 1752 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YTVNVQRE 9 Y+VN+Q++ Sbjct: 916 YSVNLQKQ 923>XP_005255375 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_006713725 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>XP_006713724 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>XP_006713723 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RYTVNV 6 RYT+NV Sbjct: 502 RYTLNV 507>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YTVNVQRE 9 YTVNV + Sbjct: 717 YTVNVNED 724>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YTVNVQRE 9 YTVNV + Sbjct: 717 YTVNVNED 724>NP_055102 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YTVNVQRE 9 YT++ Q+E Sbjct: 375 YTIHAQKE 382Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.129 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,984 Number of extensions: 617 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |