Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 XP_006715635 17 2528 NP_114155 17 2528 NP_060034 17 4312 NP_001164225 17 4312 XP_006719539 17 4312 XP_006710440 17 4312 NP_000172 16 5631 NP_689585 16 5631 NP_005415 16 5631 NP_001240286 16 5631 XP_005250354 16 5631 XP_005248296 16 5631 XP_005248295 16 5631 XP_006710932 16 5631 XP_005271221 16 5631 XP_005271220 16 5631 NP_009208 16 5631 NP_078962 16 7355 NP_001177874 16 7355 NP_001177876 16 7355 NP_005649 16 7355 NP_001275664 16 7355 NP_001275665 16 7355 NP_008972 16 7355 NP_001104582 16 7355 NP_005330 16 7355 NP_997245 16 7355 XP_005269517 16 7355 XP_005263984 16 7355 XP_005263983 16 7355 XP_005263982 16 7355 XP_005263981 16 7355 XP_005263980 16 7355 XP_006710966 16 7355 XP_005271267 16 7355 XP_005271266 16 7355 XP_005271265 16 7355 NP_001129496 15 9605 NP_938011 15 9605 NP_056046 15 9605 NP_001026871 15 9605 XP_005274596 15 9605 XP_006718233 15 9605 XP_006716625 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RYKLEVRLY 9 RYKL VRLY Sbjct: 445 RYKLGVRLY 453>XP_006715635 Length = 519 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RYKLEVRLY 9 RYK ++R+Y Sbjct: 178 RYKCDLRIY 186>NP_114155 Length = 592 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RYKLEVRLY 9 RYK ++R+Y Sbjct: 251 RYKCDLRIY 259>NP_060034 Length = 2551 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY EVR Y Sbjct: 72 RYTFEVRTY 80>NP_001164225 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+LE+R++ Sbjct: 128 YRLEIRIF 135>XP_006719539 Length = 2246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY EVR Y Sbjct: 72 RYTFEVRTY 80>XP_006710440 Length = 792 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+LE+R++ Sbjct: 123 YRLEIRIF 130>NP_000172 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 256 FKLEVRL 262>NP_689585 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RYKLEVR 7 RY++EVR Sbjct: 1380 RYRMEVR 1386>NP_005415 Length = 1138 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+L+V+LY Sbjct: 616 YQLDVQLY 623>NP_001240286 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+L+V+LY Sbjct: 571 YQLDVQLY 578>XP_005250354 Length = 600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 256 FKLEVRL 262>XP_005248296 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYKLEVRLY 9 RYK E +LY Sbjct: 349 RYKDEAQLY 357>XP_005248295 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYKLEVRLY 9 RYK E +LY Sbjct: 464 RYKDEAQLY 472>XP_006710932 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+L+V+LY Sbjct: 261 YQLDVQLY 268>XP_005271221 Length = 830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+L+V+LY Sbjct: 616 YQLDVQLY 623>XP_005271220 Length = 1095 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKLEVRLY 9 Y+L+V+LY Sbjct: 573 YQLDVQLY 580>NP_009208 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RYKLEVRLY 9 RYK E +LY Sbjct: 464 RYKDEAQLY 472>NP_078962 Length = 887 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YK ++R+Y Sbjct: 200 YKFDLRIY 207>NP_001177874 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YKL +RLY Sbjct: 303 YKLCLRLY 310>NP_001177876 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YKL +RLY Sbjct: 181 YKLCLRLY 188>NP_005649 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YKL +RLY Sbjct: 303 YKLCLRLY 310>NP_001275664 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 172 HKLEVRL 178>NP_001275665 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 261 HKLEVRL 267>NP_008972 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 268 HKLEVRL 274>NP_001104582 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RYKLEVRL 8 RY+LE+++ Sbjct: 55 RYQLEIKI 62>NP_005330 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RYKLEVRL 8 RY+LE+++ Sbjct: 55 RYQLEIKI 62>NP_997245 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 708 RYSAEVRL 715>XP_005269517 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YKLEVRL 8 +KLEVRL Sbjct: 285 HKLEVRL 291>XP_005263984 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 708 RYSAEVRL 715>XP_005263983 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 708 RYSAEVRL 715>XP_005263982 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 722 RYSAEVRL 729>XP_005263981 Length = 990 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 736 RYSAEVRL 743>XP_005263980 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RYKLEVRL 8 RY EVRL Sbjct: 736 RYSAEVRL 743>XP_006710966 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YK ++R+Y Sbjct: 200 YKFDLRIY 207>XP_005271267 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YK ++R+Y Sbjct: 111 YKFDLRIY 118>XP_005271266 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YK ++R+Y Sbjct: 111 YKFDLRIY 118>XP_005271265 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 YKLEVRLY 9 YK ++R+Y Sbjct: 173 YKFDLRIY 180>NP_001129496 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY + RLY Sbjct: 1437 RYSVRCRLY 1445>NP_938011 Length = 1630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY + RLY Sbjct: 1593 RYSVRCRLY 1601>NP_056046 Length = 1436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RYKLEVRLY 9 RYK++ LY Sbjct: 1298 RYKVQNNLY 1306>NP_001026871 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY E+R Y Sbjct: 131 RYPAEIRKY 139>XP_005274596 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RYKLEVRLY 9 RY + RLY Sbjct: 1614 RYSVRCRLY 1622>XP_006718233 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RYKLEVRLY 9 RYK++ LY Sbjct: 644 RYKVQNNLY 652>XP_006716625 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLEVRLY 9 KLE RLY Sbjct: 65 KLEERLY 71Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.152 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,260 Number of extensions: 848 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |