Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 21 229 XP_006716142 21 229 XP_005250088 21 229 XP_006716141 21 229 XP_005250085 21 229 XP_006716140 21 229 XP_005250084 21 229 XP_005250083 21 229 XP_005250082 21 229 NP_003473 19 665 XP_006719679 19 665 XP_005269219 19 665 XP_006719678 19 665 XP_006719677 19 665 NP_055561 17 4312 XP_005246260 17 4312 XP_005246259 17 4312 XP_005246258 17 4312 XP_005246257 17 4312 XP_006711972 17 4312 NP_001035706 16 5631 NP_542415 16 5631 NP_542416 16 5631 NP_542414 16 5631 NP_006255 16 5631 NP_001268697 16 5631 XP_005254998 16 5631 XP_005249642 16 5631 XP_005249641 16 5631 XP_005263224 16 5631 NP_066939 16 5631 NP_001139317 16 7355 NP_598334 16 7355 NP_002932 16 7355 NP_775752 16 7355 NP_001073890 16 7355 XP_006722755 16 7355 XP_005259550 16 7355 XP_006713341 16 7355 XP_006713340 16 7355 XP_006713339 16 7355 XP_001716411 16 7355 NP_116558 16 7355 NP_006436 15 9605 NP_001127845 15 9605 NP_036361 15 9605 NP_001165405 15 9605 NP_001165404 15 9605 NP_071407 15 9605 NP_071317 15 9605 NP_061915 15 9605 XP_006718005 15 9605 XP_006718004 15 9605 XP_006718003 15 9605 XP_005269696 15 9605 XP_005269695 15 9605 XP_005269694 15 9605 XP_005269693 15 9605 XP_005269692 15 9605 XP_005269691 15 9605 XP_005269690 15 9605 XP_005269689 15 9605 XP_005250520 15 9605 XP_006716093 15 9605 XP_005250519 15 9605 XP_005275746 15 9605 XP_003403671 15 9605 XP_006710003 15 9605>NP_733751 Length = 4911 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4524 RVYVQRDEV 4532>XP_006716142 Length = 4927 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4540 RVYVQRDEV 4548>XP_005250088 Length = 4928 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4541 RVYVQRDEV 4549>XP_006716141 Length = 4959 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4572 RVYVQRDEV 4580>XP_005250085 Length = 4979 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4596 RVYVQRDEV 4604>XP_006716140 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4595 RVYVQRDEV 4603>XP_005250084 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4595 RVYVQRDEV 4603>XP_005250083 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4595 RVYVQRDEV 4603>XP_005250082 Length = 4983 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVYVQRD+V Sbjct: 4596 RVYVQRDEV 4604>NP_003473 Length = 5537 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVY++RD+V Sbjct: 5154 RVYIERDEV 5162>XP_006719679 Length = 5536 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVY++RD+V Sbjct: 5153 RVYIERDEV 5161>XP_005269219 Length = 5537 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVY++RD+V Sbjct: 5154 RVYIERDEV 5162>XP_006719678 Length = 5539 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVY++RD+V Sbjct: 5156 RVYIERDEV 5164>XP_006719677 Length = 5540 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 RVY++RD+V Sbjct: 5157 RVYIERDEV 5165>NP_055561 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 189 KVYIERDE 196>XP_005246260 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 189 KVYIERDE 196>XP_005246259 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 189 KVYIERDE 196>XP_005246258 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 189 KVYIERDE 196>XP_005246257 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 189 KVYIERDE 196>XP_006711972 Length = 300 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 +VY++RD+ Sbjct: 197 KVYIERDE 204>NP_001035706 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 RV++++DD Sbjct: 440 RVFIEQDD 447>NP_542415 Length = 2294 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y+Q DD+ Sbjct: 1851 YIQEDDI 1857>NP_542416 Length = 2490 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y+Q DD+ Sbjct: 2047 YIQEDDI 2053>NP_542414 Length = 2485 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y+Q DD+ Sbjct: 2042 YIQEDDI 2048>NP_006255 Length = 2466 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y+Q DD+ Sbjct: 2023 YIQEDDI 2029>NP_001268697 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVYVQRDD 8 ++Y+QR D Sbjct: 68 KIYIQRHD 75>XP_005254998 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVYVQRDD 8 RV++++DD Sbjct: 440 RVFIEQDD 447>XP_005249642 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVYVQRDD 8 ++Y+QR D Sbjct: 293 KIYIQRHD 300>XP_005249641 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVYVQRDD 8 ++Y+QR D Sbjct: 293 KIYIQRHD 300>XP_005263224 Length = 2491 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y+Q DD+ Sbjct: 2048 YIQEDDI 2054>NP_066939 Length = 1119 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RVYVQRDD 8 ++Y+QR D Sbjct: 293 KIYIQRHD 300>NP_001139317 Length = 1551 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1122 RMYLQQDEL 1130>NP_598334 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1177 RMYLQQDEL 1185>NP_002932 Length = 1651 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1222 RMYLQQDEL 1230>NP_775752 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VYVQRDDV 9 +YVQRD V Sbjct: 349 LYVQRDIV 356>NP_001073890 Length = 1703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y QR+DV Sbjct: 358 YAQREDV 364>XP_006722755 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y QR+DV Sbjct: 358 YAQREDV 364>XP_005259550 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VYVQRDDV 9 +YVQRD V Sbjct: 349 LYVQRDIV 356>XP_006713341 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1171 RMYLQQDEL 1179>XP_006713340 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1186 RMYLQQDEL 1194>XP_006713339 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVYVQRDDV 9 R+Y+Q+D++ Sbjct: 1187 RMYLQQDEL 1195>XP_001716411 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YVQRDDV 9 ++QRDD+ Sbjct: 111 FIQRDDL 117>NP_116558 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YVQRDDV 9 YV++DD+ Sbjct: 142 YVEQDDI 148>NP_006436 Length = 2335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VYVQRDDV 9 +YV DD+ Sbjct: 2090 IYVSSDDI 2097>NP_001127845 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 141 FIQRDD 146>NP_036361 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 141 FIQRDD 146>NP_001165405 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 708 IYILRDD 714>NP_001165404 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 708 IYILRDD 714>NP_071407 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2948 IYILRDD 2954>NP_071317 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VYVQRDDV 9 +Y+ DDV Sbjct: 376 IYITEDDV 383>NP_061915 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y++ DDV Sbjct: 513 YIEEDDV 519>XP_006718005 Length = 3397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2991 IYILRDD 2997>XP_006718004 Length = 3399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2993 IYILRDD 2999>XP_006718003 Length = 3419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 3013 IYILRDD 3019>XP_005269696 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 112 FIQRDD 117>XP_005269695 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 117 FIQRDD 122>XP_005269694 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 120 FIQRDD 125>XP_005269693 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 141 FIQRDD 146>XP_005269692 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 149 FIQRDD 154>XP_005269691 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 149 FIQRDD 154>XP_005269690 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 149 FIQRDD 154>XP_005269689 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVQRDD 8 ++QRDD Sbjct: 149 FIQRDD 154>XP_005250520 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y++ DDV Sbjct: 513 YIEEDDV 519>XP_006716093 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y++ DDV Sbjct: 519 YIEEDDV 525>XP_005250519 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 YVQRDDV 9 Y++ DDV Sbjct: 519 YIEEDDV 525>XP_005275746 Length = 3352 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2946 IYILRDD 2952>XP_003403671 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2948 IYILRDD 2954>XP_006710003 Length = 3374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VYVQRDD 8 +Y+ RDD Sbjct: 2968 IYILRDD 2974Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.146 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 572,194 Number of extensions: 1053 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |