Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_004320 17 2528 NP_001137378 17 4312 NP_006691 17 4312 NP_001092882 17 4312 NP_006757 17 4312 NP_001092883 17 4312 XP_005273706 17 4312 NP_001277007 16 5631 NP_000450 16 5631 NP_001277006 16 5631 NP_055396 16 5631 NP_001275916 16 5631 NP_078945 16 5631 NP_116567 16 5631 NP_002581 16 5631 XP_006717149 16 5631 XP_005251620 16 5631 XP_005251618 16 5631 XP_005248296 16 5631 XP_005248295 16 5631 NP_009208 16 5631 NP_115575 16 7355 NP_001138663 16 7355 NP_004220 16 7355 NP_001074012 16 7355 NP_067054 16 7355 NP_036533 16 7355 XP_005272758 16 7355 XP_005272757 16 7355 XP_005272756 16 7355 XP_005261968 16 7355 XP_005261966 16 7355 XP_005261967 16 7355 XP_006724476 16 7355 XP_005261965 16 7355 NP_478056 15 9605 NP_848512 15 9605 NP_848510 15 9605 NP_001258152 15 9605 NP_060225 15 9605 NP_036425 15 9605 NP_001684 15 9605 XP_006715865 15 9605 XP_006711959 15 9605 XP_005264764 15 9605 XP_006711892 15 9605 XP_006711891 15 9605 XP_006711890 15 9605 XP_006711889 15 9605 XP_005273367 15 9605 XP_005273366 15 9605 XP_006711888 15 9605 XP_006711887 15 9605 XP_005273364 15 9605 XP_005273362 15 9605 XP_005273361 15 9605 XP_006711886 15 9605 XP_006711885 15 9605 XP_005273359 15 9605 XP_006711884 15 9605 XP_005273357 15 9605 XP_005273356 15 9605 XP_005273358 15 9605 XP_005273355 15 9605 XP_005273353 15 9605 XP_005273352 15 9605 XP_005273354 15 9605 XP_005273349 15 9605 XP_006711883 15 9605 XP_005273350 15 9605 XP_005273351 15 9605 XP_006711882 15 9605 XP_005273348 15 9605 XP_005273346 15 9605 XP_005273347 15 9605 XP_005273345 15 9605 XP_005273344 15 9605 NP_001180384 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RVQGRNAD 8 RVQGRNAD Sbjct: 276 RVQGRNAD 283>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RVQGRNAD 8 RVQGRNAD Sbjct: 276 RVQGRNAD 283>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RVQGRNAD 8 RVQGRNAD Sbjct: 276 RVQGRNAD 283>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RVQGRNAD 8 RVQGRNAD Sbjct: 276 RVQGRNAD 283>NP_004320 Length = 532 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVQGRNADT 9 RVQG+N D+ Sbjct: 20 RVQGQNLDS 28>NP_001137378 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQGRNADT 9 +QGRN D+ Sbjct: 494 IQGRNRDS 501>NP_006691 Length = 582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQGRNADT 9 +QGRN D+ Sbjct: 494 IQGRNRDS 501>NP_001092882 Length = 2004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 R QG+NAD Sbjct: 269 RDQGKNAD 276>NP_006757 Length = 2004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 R QG+NAD Sbjct: 269 RDQGKNAD 276>NP_001092883 Length = 2004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 R QG+NAD Sbjct: 269 RDQGKNAD 276>XP_005273706 Length = 1997 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 R QG+NAD Sbjct: 269 RDQGKNAD 276>NP_001277007 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 +VQG+N D Sbjct: 528 KVQGKNED 535>NP_000450 Length = 1124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 +VQG+N D Sbjct: 675 KVQGKNED 682>NP_001277006 Length = 1081 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 +VQG+N D Sbjct: 632 KVQGKNED 639>NP_055396 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQGRNADT 9 ++ GRN+DT Sbjct: 127 KLVGRNSDT 135>NP_001275916 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQGRNADT 9 ++ GRN+DT Sbjct: 127 KLVGRNSDT 135>NP_078945 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VQGRNADT 9 V GR ADT Sbjct: 69 VSGRQADT 76>NP_116567 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 RVQ R+AD Sbjct: 635 RVQARDAD 642>NP_002581 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 RVQ R+AD Sbjct: 635 RVQARDAD 642>XP_006717149 Length = 137 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQGRNADT 9 ++ GRN+DT Sbjct: 94 KLVGRNSDT 102>XP_005251620 Length = 1080 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 +VQG+N D Sbjct: 632 KVQGKNED 639>XP_005251618 Length = 1123 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQGRNAD 8 +VQG+N D Sbjct: 675 KVQGKNED 682>XP_005248296 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R++G ADT Sbjct: 259 RIEGTQADT 267>XP_005248295 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R++G ADT Sbjct: 259 RIEGTQADT 267>NP_009208 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R++G ADT Sbjct: 259 RIEGTQADT 267>NP_115575 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QGRNAD 8 QGRN+D Sbjct: 84 QGRNSD 89>NP_001138663 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVQGRNAD 8 ++QG+N+D Sbjct: 445 KLQGKNSD 452>NP_004220 Length = 1454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGRN T Sbjct: 711 RLQGRNNRT 719>NP_001074012 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QGRNAD 8 QG+NAD Sbjct: 356 QGKNAD 361>NP_067054 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QGRNAD 8 QG+NAD Sbjct: 356 QGKNAD 361>NP_036533 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 688 QGKNLDT 694>XP_005272758 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGRN T Sbjct: 595 RLQGRNNRT 603>XP_005272757 Length = 1410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGRN T Sbjct: 711 RLQGRNNRT 719>XP_005272756 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGRN T Sbjct: 711 RLQGRNNRT 719>XP_005261968 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 688 QGKNLDT 694>XP_005261966 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 688 QGKNLDT 694>XP_005261967 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 688 QGKNLDT 694>XP_006724476 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 688 QGKNLDT 694>XP_005261965 Length = 1920 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QGRNADT 9 QG+N DT Sbjct: 770 QGKNLDT 776>NP_478056 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RVQGRNA 7 R+QGR A Sbjct: 679 RIQGRKA 685>NP_848512 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RVQGRNA 7 R+QGR A Sbjct: 682 RIQGRKA 688>NP_848510 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RVQGRNA 7 R+QGR A Sbjct: 679 RIQGRKA 685>NP_001258152 Length = 8923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2624 KVQGRN 2629>NP_060225 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVQGRNADT 9 ++QG++A+T Sbjct: 441 KLQGKSAET 449>NP_036425 Length = 1479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGR+ T Sbjct: 227 RIQGRSVAT 235>NP_001684 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 RV+GRN Sbjct: 340 RVEGRN 345>XP_006715865 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RVQGRNA 7 R+QGR A Sbjct: 701 RIQGRKA 707>XP_006711959 Length = 1388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGR+ T Sbjct: 227 RIQGRSVAT 235>XP_005264764 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVQGRNADT 9 R+QGR+ T Sbjct: 203 RIQGRSVAT 211>XP_006711892 Length = 6865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2440 KVQGRN 2445>XP_006711891 Length = 8925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2624 KVQGRN 2629>XP_006711890 Length = 6957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711889 Length = 7297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273367 Length = 7677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273366 Length = 7678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711888 Length = 8059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711887 Length = 8499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273364 Length = 8653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273362 Length = 8675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273361 Length = 8763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711886 Length = 8833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711885 Length = 8835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273359 Length = 8843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2348 KVQGRN 2353>XP_006711884 Length = 8847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273357 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273356 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273358 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273355 Length = 8924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273353 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2440 KVQGRN 2445>XP_005273352 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2440 KVQGRN 2445>XP_005273354 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2440 KVQGRN 2445>XP_005273349 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711883 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273350 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273351 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_006711882 Length = 8977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2482 KVQGRN 2487>XP_005273348 Length = 9015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273346 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273347 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273345 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>XP_005273344 Length = 9027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQGRN 6 +VQGRN Sbjct: 2532 KVQGRN 2537>NP_001180384 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RVQGRNADT 9 ++QG++A+T Sbjct: 406 KLQGKSAET 414Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.127 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 605,283 Number of extensions: 1034 Number of successful extensions: 82 Number of sequences better than 10000.0: 82 Number of HSP's gapped: 82 Number of HSP's successfully gapped: 82 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |