Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257903 18 1935 XP_006721269 18 1935 NP_115272 17 4312 NP_061750 17 4312 NP_001230174 17 4312 NP_002719 17 4312 XP_005272458 17 4312 XP_006716327 17 4312 NP_699163 17 4312 NP_005284 17 4312 NP_004553 16 5631 NP_054642 16 5631 NP_037386 16 5631 NP_116207 16 5631 NP_004477 16 5631 XP_005268867 16 5631 XP_005268866 16 5631 XP_005251989 16 5631 XP_005251988 16 5631 XP_005251987 16 5631 NP_996766 16 7355 NP_945350 16 7355 NP_001161434 16 7355 NP_996767 16 7355 XP_006716039 16 7355 XP_006716038 16 7355 NP_689969 15 9605 NP_001272368 15 9605 NP_060318 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_064716 15 9605 NP_001184226 15 9605 NP_660352 15 9605 NP_001192067 15 9605 NP_599025 15 9605 NP_001035544 15 9605 NP_001268662 15 9605 NP_001018855 15 9605 NP_075062 15 9605 NP_001268661 15 9605 XP_005260996 15 9605 XP_005260995 15 9605 XP_006723275 15 9605 XP_006723274 15 9605 XP_006718537 15 9605 XP_006718536 15 9605 XP_006718535 15 9605 XP_006714526 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_002031 15 9605 NP_602298 15 9605 NP_036283 15 9605 NP_001007525 15 9605 NP_001007524 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001257903 Length = 5121 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQCSLSRV 9 R++C LSR+ Sbjct: 3725 RIRCKLSRI 3733>XP_006721269 Length = 5138 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVQCSLSRV 9 R++C LSR+ Sbjct: 3742 RIRCKLSRI 3750>NP_115272 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VQCSLSR 8 V+CSLSR Sbjct: 382 VRCSLSR 388>NP_061750 Length = 929 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VQCSLSR 8 V+CSLSR Sbjct: 382 VRCSLSR 388>NP_001230174 Length = 211 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVQCSLS 7 R+QCS+S Sbjct: 133 RIQCSVS 139>NP_002719 Length = 222 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVQCSLS 7 R+QCS+S Sbjct: 144 RIQCSVS 150>XP_005272458 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 +QC LSR+ Sbjct: 163 IQCQLSRL 170>XP_006716327 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 +QC LSR+ Sbjct: 241 IQCQLSRL 248>NP_699163 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 +QC LSR+ Sbjct: 241 IQCQLSRL 248>NP_005284 Length = 358 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQCSLSR 8 R+ C+LSR Sbjct: 218 RIMCALSR 225>NP_004553 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 RVQCS R Sbjct: 163 RVQCSTCR 170>NP_054642 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 RVQCS R Sbjct: 163 RVQCSTCR 170>NP_037386 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CSLSR Sbjct: 265 VSCSLSR 271>NP_116207 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QCSLSRV 9 QC LSRV Sbjct: 282 QCHLSRV 288>NP_004477 Length = 1002 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QCSLSRV 9 +CS+SRV Sbjct: 426 ECSMSRV 432>XP_005268867 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CSLSR Sbjct: 265 VSCSLSR 271>XP_005268866 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CSLSR Sbjct: 265 VSCSLSR 271>XP_005251989 Length = 975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QCSLSRV 9 +CS+SRV Sbjct: 399 ECSMSRV 405>XP_005251988 Length = 1002 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QCSLSRV 9 +CS+SRV Sbjct: 426 ECSMSRV 432>XP_005251987 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QCSLSRV 9 +CS+SRV Sbjct: 453 ECSMSRV 459>NP_996766 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 393 ISCSLSR 399>NP_945350 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 393 ISCSLSR 399>NP_001161434 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 393 ISCSLSR 399>NP_996767 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 393 ISCSLSR 399>XP_006716039 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 393 ISCSLSR 399>XP_006716038 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 + CSLSR Sbjct: 127 ISCSLSR 133>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VQCSLSRV 9 + C LSR+ Sbjct: 216 IDCQLSRI 223>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VQCSLSRV 9 + C LSR+ Sbjct: 216 IDCQLSRI 223>NP_060318 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QCSLSR 8 QC+LSR Sbjct: 1055 QCALSR 1060>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 5895 RFECELSR 5902>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 6020 RFECELSR 6027>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 13319 RFECELSR 13326>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 12392 RFECELSR 12399>NP_064716 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VQCSLSRV 9 + C LSRV Sbjct: 9 IACQLSRV 16>NP_001184226 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQCSL 6 R+QCSL Sbjct: 58 RLQCSL 63>NP_660352 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V C+LSR+ Sbjct: 149 VLCTLSRI 156>NP_001192067 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V C+LSR+ Sbjct: 131 VLCTLSRI 138>NP_599025 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 398 VSCSMSR 404>NP_001035544 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 377 VSCSMSR 383>NP_001268662 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 291 VSCSMSR 297>NP_001018855 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQCSLSR 8 R +C+LSR Sbjct: 622 RYRCTLSR 629>NP_075062 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 398 VSCSMSR 404>NP_001268661 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 362 VSCSMSR 368>XP_005260996 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQCSL 6 R+QCSL Sbjct: 58 RLQCSL 63>XP_005260995 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQCSL 6 R+QCSL Sbjct: 58 RLQCSL 63>XP_006723275 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQCSLSR 8 R +C+LSR Sbjct: 535 RYRCTLSR 542>XP_006723274 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVQCSLSR 8 R +C+LSR Sbjct: 599 RYRCTLSR 606>XP_006718537 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006718536 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006718535 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V C+LSR+ Sbjct: 149 VLCTLSRI 156>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VQCSLSRV 9 + C LSR+ Sbjct: 216 IDCQLSRI 223>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 1632 RFECELSR 1639>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 2991 RFECELSR 2998>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 12947 RFECELSR 12954>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 14453 RFECELSR 14460>NP_002031 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RVQCSL 6 R+QCSL Sbjct: 58 RLQCSL 63>NP_602298 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VQCSLSR 8 V CS+SR Sbjct: 398 VSCSMSR 404>NP_036283 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V+C +SRV Sbjct: 267 VRCEVSRV 274>NP_001007525 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V+C +SRV Sbjct: 267 VRCEVSRV 274>NP_001007524 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQCSLSRV 9 V+C +SRV Sbjct: 267 VRCEVSRV 274>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 14960 RFECELSR 14967>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RVQCSLSR 8 R +C LSR Sbjct: 6087 RFECELSR 6094Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.131 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 630,516 Number of extensions: 549 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |