Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 17 2528 NP_001075109 17 2528 NP_009187 17 2528 XP_006718490 17 2528 NP_001138684 17 2528 NP_001138683 17 2528 NP_443111 16 5631 NP_003466 16 5631 NP_954660 16 5631 NP_954658 16 5631 NP_001137465 16 5631 NP_001164274 16 5631 XP_005253208 16 5631 XP_006725209 16 5631 XP_006725208 16 5631 XP_006725207 16 5631 XP_006725206 16 5631 XP_006725205 16 5631 XP_005268670 16 5631 XP_006719278 16 5631 XP_006718401 16 5631 XP_006718400 16 5631 XP_005253207 16 5631 XP_005253206 16 5631 XP_005253205 16 5631 XP_005253204 16 5631 NP_001164279 16 5631 NP_001137466 16 5631 NP_061871 16 7355 NP_055791 16 7355 XP_005269704 16 7355 XP_005266147 16 7355 XP_005266146 16 7355 NP_001257438 15 9605 NP_001243054 15 9605 NP_002817 15 9605 NP_001004128 15 9605 NP_003456 15 9605 NP_001244930 15 9605 NP_970615 15 9605 NP_001161771 15 9605 NP_001244932 15 9605 NP_068569 15 9605 NP_002018 15 9605>NP_008835 Length = 4128 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVLVQTLRE 9 RVLVQTL E Sbjct: 1370 RVLVQTLCE 1378>NP_001075109 Length = 4097 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVLVQTLRE 9 RVLVQTL E Sbjct: 1370 RVLVQTLCE 1378>NP_009187 Length = 709 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RVLVQTLR 8 RVL+QTLR Sbjct: 362 RVLLQTLR 369>XP_006718490 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RVLVQTLR 8 RVL+QTLR Sbjct: 362 RVLLQTLR 369>NP_001138684 Length = 565 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RVLVQTLR 8 RVL+QTLR Sbjct: 218 RVLLQTLR 225>NP_001138683 Length = 687 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RVLVQTLR 8 RVL+QTLR Sbjct: 340 RVLLQTLR 347>NP_443111 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 633 VLVQPLRE 640>NP_003466 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>NP_954660 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 562 VLVQPLRE 569>NP_954658 Length = 723 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 632 VLVQPLRE 639>NP_001137465 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>NP_001164274 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 491 VLVQPLRE 498>XP_005253208 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_006725209 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_006725208 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_006725207 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>XP_006725206 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>XP_006725205 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>XP_005268670 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 563 VLVQPLRE 570>XP_006719278 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 579 VLVQPLRE 586>XP_006718401 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_006718400 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_005253207 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>XP_005253206 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>XP_005253205 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>XP_005253204 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 115 VLVQRLRE 122>NP_001164279 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 562 VLVQPLRE 569>NP_001137466 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ LRE Sbjct: 48 VLVQRLRE 55>NP_061871 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 V VQTLRE Sbjct: 83 VEVQTLRE 90>NP_055791 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VL+QTL E Sbjct: 835 VLIQTLAE 842>XP_005269704 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VL+QTL E Sbjct: 835 VLIQTLAE 842>XP_005266147 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 V VQTLRE Sbjct: 175 VEVQTLRE 182>XP_005266146 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 V VQTLRE Sbjct: 175 VEVQTLRE 182>NP_001257438 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVQTLRE 9 L+QTLR+ Sbjct: 332 LIQTLRQ 338>NP_001243054 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVQTLRE 9 L+QTLR+ Sbjct: 358 LIQTLRQ 364>NP_002817 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VQTLRE 9 VQTLRE Sbjct: 143 VQTLRE 148>NP_001004128 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VQTLRE 9 VQTLRE Sbjct: 143 VQTLRE 148>NP_003456 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVQTLRE 9 L+QTLR+ Sbjct: 377 LIQTLRQ 383>NP_001244930 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ +RE Sbjct: 49 VLVQEMRE 56>NP_970615 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ +RE Sbjct: 157 VLVQEMRE 164>NP_001161771 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VQTLRE 9 VQTLRE Sbjct: 4 VQTLRE 9>NP_001244932 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ +RE Sbjct: 49 VLVQEMRE 56>NP_068569 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVQTLRE 9 VLVQ +RE Sbjct: 49 VLVQEMRE 56>NP_002018 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVLVQTLRE 9 RVLV+ LR+ Sbjct: 173 RVLVEWLRD 181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.141 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 335,966 Number of extensions: 739 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |